Gene Shel_28140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_28140 
Symbol 
ID8396702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3118411 
End bp3119268 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content64% 
IMG OID644987553 
Productphosphate-binding protein 
Protein accessionYP_003145153 
Protein GI257065481 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR02136] phosphate binding protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.549529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA AGAACATTGT AAGGGCGGCT GGATGCATGG CCGCAGTTGC AGCTCTGGCT 
TGCTCGATGG TAGCGTGCGG CGGCTCCGGT GCCGAAGGGG GTGCGGATGG GGCGTCGGGC
GAGCTCTCGG GAACCATCGC CACCAACGGA TCGACCTCTA TGGAGAAGGT CATCGGCACG
CTGGCCGAGC AATTCATGGC CGACAACCCT GGCGTAACCA TCACCTACGA TGCCACCGGT
TCCGGCACGG GCATCGAGTG CGCCAAGAAC GGCTCGGCCG ACATCGGCCT GGCCTCCCGC
GATCTTAAGG ATGAGGAGAC CGGCCTTGAA ACCGTCACCG TCGCCCTGGA TGGCATCGTG
GTCATCGTGA ACGAGGGCTG TGGCGTCGAC GACTTGTCCC TCGAGCAGAT CGCCGCCATC
TTCAATGGCG AAATCACCAA TTGGAAAGAA GTCGGCGGCG CTGACCTGGC AATCTCCTGC
ATCGGCCGCG AGAGCGGATC GGGTACCCGC GACGGCTTCG AGTCCATCAC CGGCACCGAA
GACACCTGCA AGCTTGAGCA GGAGCTGACG TCCACCGGCG CGGTCATCAC GGCTGTCAGC
AGCTCCGAGA ACGCCATCGG CTATGCGTCC CTCTCCTCTG TCGAGGGCCA ACAGGGCATC
AAGGCCGTCA CCGTGGACGG CGTCGCCTGC ACCGAAGAGA CGGTCGCCGA CGGTTCGTAC
AAGATCCAGC GTCCCTTCAA CTTCGTCCTG ATGGAAGGCG CCACGCCTTC GCCCGCAGCC
GAAGCCTTCA TCGAATTCGC GACCAGCCCC GAAGCAGCTG ACCTCGTGCG CTCGGCGGAC
GCCATCCCGG CCTCCTAA
 
Protein sequence
MKFKNIVRAA GCMAAVAALA CSMVACGGSG AEGGADGASG ELSGTIATNG STSMEKVIGT 
LAEQFMADNP GVTITYDATG SGTGIECAKN GSADIGLASR DLKDEETGLE TVTVALDGIV
VIVNEGCGVD DLSLEQIAAI FNGEITNWKE VGGADLAISC IGRESGSGTR DGFESITGTE
DTCKLEQELT STGAVITAVS SSENAIGYAS LSSVEGQQGI KAVTVDGVAC TEETVADGSY
KIQRPFNFVL MEGATPSPAA EAFIEFATSP EAADLVRSAD AIPAS