Gene Shel_28110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_28110 
Symbol 
ID8396699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3115858 
End bp3116610 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content60% 
IMG OID644987550 
Productphosphate ABC transporter ATP-binding protein 
Protein accessionYP_003145150 
Protein GI257065478 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.836167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCAT TCGAAGTAAC CGGACTCAAC CTCTGGTATG GCAGCCACCA TGCGCTCCAT 
GACATCAATA TCAACATCCC CAAAAACAAG GTCACCGCGC TGATCGGCCC CAGCGGATGC
GGCAAATCCA CCTTCCTCAA GACGTTGAAC CGCATGCAAG ACCTGGTCAA GACCGTAAAG
ATCGAGGGCC AGGTGCTCTT CGAAGGCCAG GACATCTACG ACCCCAAGGC CGACGTCAAC
GAAATCCGAA AAGAAGTCGG CATGGTGTTC CAGAAAGCGA ATCCGTTCCC CATGAGCATC
TACGAGAACG TCGCGTACGG ACCGAAGATC CATGGAATCC GGAGCAAGAA GGAGCTGGAC
CAGATCGTCG AAGAGTCGCT GCGCGGCGCC GCCCTTTGGG ACGAGACGAA AGACCGCCTC
GAGAAGAGCG CCTTGGGCCT GTCCGGCGGC CAGCAGCAGC GCCTGTGCAT CGCGCGCGCC
CTGGCGGTAA AGCCGAAGGT GCTGCTCCTC GACGAGTCCA CCAGCGCTTT GGACCCCATT
TCCACGGGCC AGATCGAAGA GCTGGTCGGC GAACTCAAGA AGGACTACAC CGTGATCATG
GTCACCCACA ACATGCAGCA GGCGGTGCGC GTGTCCGACT ACGCCGCGTT CTTCCTGCTG
GGCGACCTGA TCGAGTTCGC CCCCACCGAC GAGCTGTTCA ACAACCCGCA ACAGCCTCAG
ACAGCAGACT ACGTCAACGG CCTGTTCGGC TAG
 
Protein sequence
MNAFEVTGLN LWYGSHHALH DININIPKNK VTALIGPSGC GKSTFLKTLN RMQDLVKTVK 
IEGQVLFEGQ DIYDPKADVN EIRKEVGMVF QKANPFPMSI YENVAYGPKI HGIRSKKELD
QIVEESLRGA ALWDETKDRL EKSALGLSGG QQQRLCIARA LAVKPKVLLL DESTSALDPI
STGQIEELVG ELKKDYTVIM VTHNMQQAVR VSDYAAFFLL GDLIEFAPTD ELFNNPQQPQ
TADYVNGLFG