Gene Shel_27920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27920 
Symbol 
ID8396680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3092412 
End bp3092705 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content58% 
IMG OID644987531 
Productribosomal protein S6 
Protein accessionYP_003145134 
Protein GI257065462 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.27266e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCTT ATGAAATGCT GTTCTTTGTC GCTCCCACGC TCGACGACGA AACTCGTCTC 
GCTGCTATGA AGCGCGTCGA AACCACCATC GCCGCCAACA ACGGCCAGGT TGACAACGTC
GAGAACTGGG GTCGCCGCAA GCTCGCTTAC GAGATTGCCG GTCTGACCGA GGGTGACTAC
ACGCTCATCG ATTTCCACAT GGATCCTGCT AGCGTCGCTG AGCTCGATCG CGTCCTGCGC
ATTACCGACG CTATCGTGCG CCACAAGATC GTCCGTCGTG ACGACCGCGA GTAA
 
Protein sequence
MKAYEMLFFV APTLDDETRL AAMKRVETTI AANNGQVDNV ENWGRRKLAY EIAGLTEGDY 
TLIDFHMDPA SVAELDRVLR ITDAIVRHKI VRRDDRE