Gene Shel_27680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27680 
Symbol 
ID8396656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand+ 
Start bp3068348 
End bp3068965 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID644987510 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003145114 
Protein GI257065442 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT TAGCAATCGG CATTAAGCTG GAGCGCTGCA TTGGGTGCCA GACCTGCGCC 
TTCAGCTGCA AGATGCAGAA CAACGTGCCC GACGGCATGC TGTGGAACCG CGTGATTTCC 
GAAGGCGCCG ACAACGAGGA CGGCAGCGTG GGCACCTATC CCAACGTGAG CCGCACCTAC 
CTGCCGCTGG CCTGCCAGCA CTGCGAGAAC CCCGCCTGCC AGAAGGTGTG CCCCACCGGC 
GCCACCTACA AGGACGAGAT GGGCCGCGTG GAAATCGACT ACCAGAAGTG CATCGGCTGC 
CGCATGTGCA TGGCCGCCTG CCCGTTCAAC GCACGCGTGT TCAACTGGGT GAAGCCCGAG 
CGCGCCACCG GGTTCGACTA CGGCGACGCC GAGGTGCCCG CGCGCAAGAA GGGCGTCATG 
GAGAAGTGCA CCCTGTGCAA GGAGCGCACC GACCGCGGCG AGAACCCCAT GTGCGTCGAG 
TGCTGCCCGG CCCGCGCCCG CGTGTTCGGC GACCTGGACG ACCCCGAGTC CGAGATCTCG 
AAACTGCGCG CCTCGGGCAA CGTCCGCATC CTGCTGGAAG AAAAGGGCAC GCGCCCGCAA 
GTCTTTTACG TCAAATAA
 
Protein sequence
MTKLAIGIKL ERCIGCQTCA FSCKMQNNVP DGMLWNRVIS EGADNEDGSV GTYPNVSRTY 
LPLACQHCEN PACQKVCPTG ATYKDEMGRV EIDYQKCIGC RMCMAACPFN ARVFNWVKPE 
RATGFDYGDA EVPARKKGVM EKCTLCKERT DRGENPMCVE CCPARARVFG DLDDPESEIS 
KLRASGNVRI LLEEKGTRPQ VFYVK