Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_27640 |
Symbol | |
ID | 8396652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 3061632 |
End bp | 3062663 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644987506 |
Product | hypothetical protein |
Protein accession | YP_003145110 |
Protein GI | 257065438 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000690956 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACATCC AGCTGGGCAG CGAAACACTC GATTACCACG GCGTTCGCAT GACCCTTCCC GATTCCATGA TCATCTACGA CGACGGCGAC GACATCGACA ACGGCATCGT CAGCCTCAAC GACACCAGCA TTCCGGAATC GGGCGAGATC TCGCTCACCG TCTACAGCGA GGGAGCCGCC GATTTGTTCA GCGTTGAAAC GCTCGACCCG GAAACGTACA CGCCGGAAGC CGCCCTGTTT AACTTTGCGG AAGGTAACTT CGAAGGCAGG GTTGCCGAGC AGGAGATGCA CCGCGTGATG GTCGGCGGCA CATATGCGCT GGTCAGATAC TGGGATTGGG ATGTGGCGGA AACGTACGCC ACCATTGTCG ACCTGGTTCT GAAGGACGAG GTCATCGAGA TCACGTTCAT GGACAAGTAT AACCTTTACG GCGATGTCAT CCAGCAGTGC ATCGACAGCA TTACCATCGA CGAGGAGTGC ATCCCCGATG TGGCCACCAG GCTCTCCCCC GAAGGCTTGC AAGCGGCCGG CCTCCGCACG CAGGCGTGGG AGGCCTACGG CCTGTACATG AACGTGCCTG AGGGCTACAC GCTCATCGAC CTCGGCGACG GCAACCTCGT TTGGGGAGCC CCGGAAGGGC AGACGTACTT TGCCGTGCAG CAAACCGACA CTGCGATTCT CCAGGCTATG GTCTATGCCC CCGAAGAGGC TGAACAGATC CTTGTGGACG GCTTGTCCGC TAACCCGAGC TTCGTCGAGC TGTCGGGCTA CAGCGTCGGC ACGCTCAACA GCATGCTTGC CCTGAACTAT CAGTACAGGG CCGTCGACTC GAGCGGCGTG GAGTATATCG CCTATGTACT GGTGGTGCAG CCCTACCAGT ATTCCGACAT GGCGGTTTCC GTCTTGTCAT TCTGCTACTC CAACGAGGCG CTCGACCTCA TGAGCAACAT GCAGCAGACG ATCCGCGTCG CTGACGGATG GGTGGGCGAC GGCCTGGTCG AAGACGAGCC CGTGCCGGCT GACGAACTCT AA
|
Protein sequence | MDIQLGSETL DYHGVRMTLP DSMIIYDDGD DIDNGIVSLN DTSIPESGEI SLTVYSEGAA DLFSVETLDP ETYTPEAALF NFAEGNFEGR VAEQEMHRVM VGGTYALVRY WDWDVAETYA TIVDLVLKDE VIEITFMDKY NLYGDVIQQC IDSITIDEEC IPDVATRLSP EGLQAAGLRT QAWEAYGLYM NVPEGYTLID LGDGNLVWGA PEGQTYFAVQ QTDTAILQAM VYAPEEAEQI LVDGLSANPS FVELSGYSVG TLNSMLALNY QYRAVDSSGV EYIAYVLVVQ PYQYSDMAVS VLSFCYSNEA LDLMSNMQQT IRVADGWVGD GLVEDEPVPA DEL
|
| |