Gene Shel_27640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27640 
Symbol 
ID8396652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3061632 
End bp3062663 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content59% 
IMG OID644987506 
Producthypothetical protein 
Protein accessionYP_003145110 
Protein GI257065438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000690956 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC AGCTGGGCAG CGAAACACTC GATTACCACG GCGTTCGCAT GACCCTTCCC 
GATTCCATGA TCATCTACGA CGACGGCGAC GACATCGACA ACGGCATCGT CAGCCTCAAC
GACACCAGCA TTCCGGAATC GGGCGAGATC TCGCTCACCG TCTACAGCGA GGGAGCCGCC
GATTTGTTCA GCGTTGAAAC GCTCGACCCG GAAACGTACA CGCCGGAAGC CGCCCTGTTT
AACTTTGCGG AAGGTAACTT CGAAGGCAGG GTTGCCGAGC AGGAGATGCA CCGCGTGATG
GTCGGCGGCA CATATGCGCT GGTCAGATAC TGGGATTGGG ATGTGGCGGA AACGTACGCC
ACCATTGTCG ACCTGGTTCT GAAGGACGAG GTCATCGAGA TCACGTTCAT GGACAAGTAT
AACCTTTACG GCGATGTCAT CCAGCAGTGC ATCGACAGCA TTACCATCGA CGAGGAGTGC
ATCCCCGATG TGGCCACCAG GCTCTCCCCC GAAGGCTTGC AAGCGGCCGG CCTCCGCACG
CAGGCGTGGG AGGCCTACGG CCTGTACATG AACGTGCCTG AGGGCTACAC GCTCATCGAC
CTCGGCGACG GCAACCTCGT TTGGGGAGCC CCGGAAGGGC AGACGTACTT TGCCGTGCAG
CAAACCGACA CTGCGATTCT CCAGGCTATG GTCTATGCCC CCGAAGAGGC TGAACAGATC
CTTGTGGACG GCTTGTCCGC TAACCCGAGC TTCGTCGAGC TGTCGGGCTA CAGCGTCGGC
ACGCTCAACA GCATGCTTGC CCTGAACTAT CAGTACAGGG CCGTCGACTC GAGCGGCGTG
GAGTATATCG CCTATGTACT GGTGGTGCAG CCCTACCAGT ATTCCGACAT GGCGGTTTCC
GTCTTGTCAT TCTGCTACTC CAACGAGGCG CTCGACCTCA TGAGCAACAT GCAGCAGACG
ATCCGCGTCG CTGACGGATG GGTGGGCGAC GGCCTGGTCG AAGACGAGCC CGTGCCGGCT
GACGAACTCT AA
 
Protein sequence
MDIQLGSETL DYHGVRMTLP DSMIIYDDGD DIDNGIVSLN DTSIPESGEI SLTVYSEGAA 
DLFSVETLDP ETYTPEAALF NFAEGNFEGR VAEQEMHRVM VGGTYALVRY WDWDVAETYA
TIVDLVLKDE VIEITFMDKY NLYGDVIQQC IDSITIDEEC IPDVATRLSP EGLQAAGLRT
QAWEAYGLYM NVPEGYTLID LGDGNLVWGA PEGQTYFAVQ QTDTAILQAM VYAPEEAEQI
LVDGLSANPS FVELSGYSVG TLNSMLALNY QYRAVDSSGV EYIAYVLVVQ PYQYSDMAVS
VLSFCYSNEA LDLMSNMQQT IRVADGWVGD GLVEDEPVPA DEL