Gene Shel_27030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27030 
Symbol 
ID8396591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2986967 
End bp2988391 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content64% 
IMG OID644987445 
ProductFHA domain-containing protein 
Protein accessionYP_003145051 
Protein GI257065379 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTT TCTCTAAATT TGAAGGCAAA ATGGAGGATA CGTTCGAAGG TACGGCGAAC 
AAAATCTCCA ACGCCCCTAT CTCTCCGGTC CAAATCGTGA AGAAAGCCGA AAAGCAGATG
CGCCGCGAAC GCGTCGTTTC CGCCGGCAAG GAGTACGCGC CCACGCTGTA CACCGTTCTG
GTCAACGCCG ACGACGATCA GCGCCTGTTC GGCTTCTACC CCACGCTGGC CGGCGAAACC
GAAACCCGCC TGGCTGCCAC CGCAAGCGAC GAGGGCCTGT TCATGGACGG CCAGCCCCTG
GTGCGCTTCA TCGTGGATGA AAACCTGAAG CACGGCAAAT TCGACGTCAT CGCCGAAGTG
GTCAGCGCGC CCATCATCGA GGAGCTGCGC AAGGAAGAGA TGCAGCGCTA CGGCATGGCC
GCATCTGAGC AGTCTGTGGT TTCCGCCCAG CCCGTCGCCA TGCCCGACCC GCAGCCTGTC
GTGGCCCAAA GCCCCGTCCA GGTCCGCCCG GGCCTCGATT TGCCGGACAT CTTCGGCGCC
GACCCCGAGC CCGTCGCTGC CGTGCCCGCC TTCGCACAGC AGCCCTTCGG TTACCAGCAG
GACGCCTACG GCATGCAGAA CGGAGCCTAT CCGCAGACCG CTAACGATAT GGCCTACCCG
CAGGCTTCCG ACTACCAGCC CGTCGAAGAG GTCAAGCCCC CTCTGCCCTA TGTGCCCGAG
GAGGAGATCG ACCGTTCCAT CGATTACGGC GAGTACACCT TCGACAGCCA CAATTTCACC
GATTACAACG CACCCCAGGA GCCTGAGGCC GAAGAGCAGC CCGCTCAGAA CGCCGCCCAT
CCCGTGACCT CCAATCCGCT GGTCGCAAGC GGCACCGCTC TGCCCGACCT GCCTTCCACG
GCTCCGGACA ACGACACCTA TGCGGCCCAA GGCCAGGTAT TCGGCGCACC TGCCGCCCAG
GTCCAGGCTC CGCAGCAGTA TCAGCAGCCC CAGTACCAGC AGCAGTACGG CTACCAGCAG
CCCTACCAAC AGCCCTACGG TTACCAGCAG CCTGCCCAGC AGTACAACCC CTATGCGCCC
GCTACCAGCG CGTTCGTCGG CGGCCAGCAG CAGGTCGGAT ATCCGCCTGC GCAGCGTGCG
GCTGTAGCGC GCCTTATCGA CACGGCGTCC AACCGCGCCT ACGCACTGGC AACCCAGCGC
GTACTGGTGG GTCGCGAAAC CTCCAATGAC ATCGTGGTGA ACGACCTGAA CACCAGCCGC
CACCACGCTG AAATCCACTT CGAGCCCCAG GGCGTCTGGG TCATCACCGA TTTGGGCTCC
ACCAACGGAA CCTACGTCAA CGGCCAGCCC GTTTCCCGCC GCGGCCTGCA GGAAGGCGAC
CGCATCACCC TGGGCGCCAC GGATTTCATC TTCACGCTGC GCTAA
 
Protein sequence
MGFFSKFEGK MEDTFEGTAN KISNAPISPV QIVKKAEKQM RRERVVSAGK EYAPTLYTVL 
VNADDDQRLF GFYPTLAGET ETRLAATASD EGLFMDGQPL VRFIVDENLK HGKFDVIAEV
VSAPIIEELR KEEMQRYGMA ASEQSVVSAQ PVAMPDPQPV VAQSPVQVRP GLDLPDIFGA
DPEPVAAVPA FAQQPFGYQQ DAYGMQNGAY PQTANDMAYP QASDYQPVEE VKPPLPYVPE
EEIDRSIDYG EYTFDSHNFT DYNAPQEPEA EEQPAQNAAH PVTSNPLVAS GTALPDLPST
APDNDTYAAQ GQVFGAPAAQ VQAPQQYQQP QYQQQYGYQQ PYQQPYGYQQ PAQQYNPYAP
ATSAFVGGQQ QVGYPPAQRA AVARLIDTAS NRAYALATQR VLVGRETSND IVVNDLNTSR
HHAEIHFEPQ GVWVITDLGS TNGTYVNGQP VSRRGLQEGD RITLGATDFI FTLR