Gene Shel_26620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26620 
Symbol 
ID8396550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2937847 
End bp2939001 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content55% 
IMG OID644987404 
Producthypothetical protein 
Protein accessionYP_003145010 
Protein GI257065338 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.640234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.959468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAAG CGCTGATTCT TGTCATGATG ATGGCCTGCT TGCTGGGCGT CGTCGTGGGG 
TGCGGGTCCC AAAGCAACAC GGAGCCGAAA GACTACGGTC CGCCCATGGA CATAAGCTTG
AGTACCGAGG AGACCGAAAT GTATGGGGTT CATCTGCTTC TCCCCGACAA CTCCCCGCTC
GAACAGAGCG AGTCGGACCC CAATTACGCC CAAACAGTCG CGAACCTCGA CGATTCCCTC
ACGATTGAAA TAGTGGTTAG TATGAGCTAT TTCCCCGGTG ATGAGCAAAG TTACACCACC
AATCCGAACA GCGAAGAGAC GTATACGCCT GCGGCGATTC TGAAAGACTG GGCCGACGCC
TACTCTGACC CTGATTCAAT AACGGTTGAG GGTAAGACGC ATATCGGCGG CACCGCTGCG
CTTGTTACAA CGTCGAGTGC AGAAAGGAAA GAGAGGGGCG GCATCTACGA TCTCACCACT
ATTAGTCTTG CCATGAACTC GGGGTATGTT GTCATCTCCT ACGAGGATCG CGGTGGACGG
TATGGCGACC TTATCCAGCA AAGCATCAAA AGCATCTGGA TCGACGAAGA AGAGATTCCC
GACTTCGTTC GCGCGACGAG CCCTGAAGGC TTGCAGGCTG CCGGATTGAT GGAGCAGCCC
TGGCAGATTG ACTGCGACAT GTTCAGCATC TACGTGAATC CCCCTGCGGA TTTCATTCCT
CTCGAGCGAA CCGAAGGGAA CTACGAATGG ATAGCCCCCG ACGGGAACAC GGTGATTTCG
GCGACGGTCA CCGACAGGTC CACATTCGGT CTGTCCGAGG AAGATCTGGA GCAGCTGGAA
CAACGCATGG CTTTGACCGC ACCAGGGTTT AGCGACCTCG AATATAGCTC CGGGGTACAT
AACGACATGG ACGCTTCTAA GATGAAGTAC AAGATTGAAA ACGAAAACGG CACGACATGG
ATGTACGTGG TTACGGTCGC ACCTGAATAC TCTAATGAAG CAATCGCTGT AACAGTGGGC
AGCCGGTCCG AGGACAACGT GGAGCTGCCC GAGATGATGA ACATCCTGCG CTTTGCCGAC
GGGTGGAACA ACGGCGGCGT TCTGAACATG GAAGAAATCG CCGTGGCCCC CGAATCCGCC
GAAGACCAAG GATAA
 
Protein sequence
MKKALILVMM MACLLGVVVG CGSQSNTEPK DYGPPMDISL STEETEMYGV HLLLPDNSPL 
EQSESDPNYA QTVANLDDSL TIEIVVSMSY FPGDEQSYTT NPNSEETYTP AAILKDWADA
YSDPDSITVE GKTHIGGTAA LVTTSSAERK ERGGIYDLTT ISLAMNSGYV VISYEDRGGR
YGDLIQQSIK SIWIDEEEIP DFVRATSPEG LQAAGLMEQP WQIDCDMFSI YVNPPADFIP
LERTEGNYEW IAPDGNTVIS ATVTDRSTFG LSEEDLEQLE QRMALTAPGF SDLEYSSGVH
NDMDASKMKY KIENENGTTW MYVVTVAPEY SNEAIAVTVG SRSEDNVELP EMMNILRFAD
GWNNGGVLNM EEIAVAPESA EDQG