Gene Shel_26370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26370 
Symbol 
ID8396525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2913858 
End bp2915126 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content59% 
IMG OID644987379 
ProductNa+/H+ antiporter NhaD-like permease 
Protein accessionYP_003144988 
Protein GI257065316 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTG CCCAGATTTT TGCAATCGTT GTCTTCCTCG TTGCGATGAC CCTCATCGTT 
TCGGAGAAGG TGCACCGAAC GGTCGTGGCG CTTGCAGGCG CTATGCTGCT CATCATCTTC
CATGTCATGG ACTTCGAGAC GGCCATCGGG CACATCGACT ACAACACGTT GGGCGTGCTG
TTCGGCATGA TGCTCTTCGT GGCTGTCGTG CGCCAGTCTG GCCTGTTCGA GTTTCTGGCC
ATCAAGTGCG CAAAGCTTGC CAAGGGCGAT CCGTGGCATA TCATGATTCT GTTCGCCATC
TTGACTGCGG TTCTTTCCGC ATTCCTGGAT AACGTCACCA CGGTTTTGCT GATCGGCCCC
ATGACGCTCA CCATCTGCGA ACTGCTGAAG ATTAATCCGA TGCCGTTCTT CATGGTCGAG
ATCATGTCGT CCAACGTCGG CGGCACGGCA ACCCTCATCG GCGACCCGCC GAACATCATG
ATCGGTTCCG CAGCCGGCTA TTCCTTCGCA GACTTCATCG CGGTTGACGC CCCCGTCGTC
GTCGTGATCA TGGTCGTCAT CATCGGCGTG TTCTACGTGC TGTACGGCCG CAAGATGCAC
GTCACCGACG AGGAGAAGGC TCGCGTAATG GAGCTCGAGC CCGCTTTCGA GGACGAGCAC
CTGATGAAGC TCTCCGTCGT CATCCTTGCG ATCGTCGTCG TCGGCTTCAT GATTCACGGC
AAACTGGGCA TCGAGTCCTC CGTCGTCGCC ATTTCCGCTG CAGCCCTCAT CCTGCTACTG
TCCCGCCGCG ACGTCACCAA GGCTCTGCTG CATGTTGAGT GGACTACCCT GGCGTTCTTC
GCGGGTCTGT TCATCATCGT CGGCGGCATG GTCGAGACCG GCACCATCGA CGCCCTGGCC
AACGCGCTCA TCGACGTCAC CGGTGGCGAT GTCTTCCTGA CCATGATCGT TCTGGTCTTC
GCATCCGCCA TCATCTCGTC CTTCCTGGAC AACATCCCGT TCGTCGCTAC GATGATCCCG
ATTCTGCTGG CCATGGAAGG TTCCGGCATG GACGTTACCC CGCTGTGGTG GGCTGTCTCC
CTGGGCGCTT GCCTGGGTGG CAACGGTACC CTCATCGGCG CCTCCGCGAA CGTCGTTCTG
TCCGACATCG CGGCCAAGCA CGGCCATCCG ATCACCTTCA TCGAGTACCT CAAGACTGGC
TTCCCCGTCA TGATACTCAC CGTGGTCATC TCCTGCGTCT ACCTGATTCT GCGCTTCCCG
CCGATGTAA
 
Protein sequence
MGFAQIFAIV VFLVAMTLIV SEKVHRTVVA LAGAMLLIIF HVMDFETAIG HIDYNTLGVL 
FGMMLFVAVV RQSGLFEFLA IKCAKLAKGD PWHIMILFAI LTAVLSAFLD NVTTVLLIGP
MTLTICELLK INPMPFFMVE IMSSNVGGTA TLIGDPPNIM IGSAAGYSFA DFIAVDAPVV
VVIMVVIIGV FYVLYGRKMH VTDEEKARVM ELEPAFEDEH LMKLSVVILA IVVVGFMIHG
KLGIESSVVA ISAAALILLL SRRDVTKALL HVEWTTLAFF AGLFIIVGGM VETGTIDALA
NALIDVTGGD VFLTMIVLVF ASAIISSFLD NIPFVATMIP ILLAMEGSGM DVTPLWWAVS
LGACLGGNGT LIGASANVVL SDIAAKHGHP ITFIEYLKTG FPVMILTVVI SCVYLILRFP
PM