Gene Shel_26270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26270 
Symbol 
ID8396515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2901248 
End bp2902534 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content62% 
IMG OID644987369 
Productseryl-tRNA synthetase 
Protein accessionYP_003144979 
Protein GI257065307 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACA TCAAGTTCGT TCGTGAAAAC CAAGACGTCA TTACCCAGGC CATGAAGAAC 
CGCAACGGTT CCTGGGACGT CGATAAGTTC AATGAGCTGG ACGAATCCCG CCGTTCATAC
ATCGCCGACG AAGAGGCCAT GCAGGCGAAG CGCAACACCG CGTCCAAGCA GATCGGCGCG
CTGATGCGCG AAGGCAAGGC GGACGAGGCC GAAGCCTCCA AGGAAGAGGT CCGTGCGCTG
AACGAGAAGA TCGCCGAGGT GTCCGCGAAG CGTTCCGAAG CCGAAACCGC CCTGAACGAG
ATGCTGTGCC GCATCCCCAA TATTCCGCAT GAGTCCACGC CCGTCGGCAA GGATGAAACC
GAGAACCCCG AGGTCCGTCG CTGGGGCACT CCCCGCAAGT TCGACTTTGA ATTCAAGGCC
CACTGGGATC TGGGTGCCGA CCTCAACATC ATCGACAGCG AGCGCGCCAC CAAACTGGCC
GGCTCCCGCT TCGTGCTGCT GGGCGGCCTG GGCGCCCGTC TGGAGCGCGC GCTGATCAAC
TTCATGGCTG ACACGCACGG TTCCCGCGGC TACAAGGAAT GGTGGTGCCC GGTCATGGCG
AACGGGAACA CCCTGTACGG TACGGGCCAG CTGCCTAAGT TCGAAGAAGA CCTGTTCCAC
ACCACCGAGG GCCTGTACCT CATCCCCACG GCCGAGGTCC AGCTCACCAA TATCCACGCC
GGCGACGTGC TCGAGGCAAG CCAGCTGCCG CTGAAGTACT GCGGCTACAC CGCCTGCTTC
CGCGAGGAGG CCGGCAGCGC CGGGCGCGAC ACCCGCGGCC TGATTCGCGT ACACCAGTTC
GACAAGGTCG AAATGGTCAA ATTCGCCACC CCCGAGGATG GCTTCAACCA GCTCGAGCTC
ATGGTCGAAG ACGCGGAGAA CATCCTGCAG CTGCTGGGTC TGCCTTATCG CGTCATCTCG
CTGTGCACCG GCGACCTGGG ATTCTCCGCC GCCAAGACCT ATGACTTGGA AGTGTGGCTG
CCCAGCTACG ACGCCTACAA GGAGATCAGC TCCTGCTCCT GCTGCACCGA CTTCCAGGCA
CGCCGCGCCA ACATCAGGTA CCGCGACCCC AACAAGTTCA AGGGCACGCG TTACGTCTAC
ACGCTCAACG GCTCCGGCTT GGCTGTGGGC CGTACGATGG CTGCCGTCAT GGAGAACTAC
CAGCAGGCCG ACGGCTCCAT CAAGGTGCCC GACGTGCTGG TTCCCTACAT GGGCGGCGTC
GAAGTCATCG CTGCTGACCA GCTGTAA
 
Protein sequence
MLDIKFVREN QDVITQAMKN RNGSWDVDKF NELDESRRSY IADEEAMQAK RNTASKQIGA 
LMREGKADEA EASKEEVRAL NEKIAEVSAK RSEAETALNE MLCRIPNIPH ESTPVGKDET
ENPEVRRWGT PRKFDFEFKA HWDLGADLNI IDSERATKLA GSRFVLLGGL GARLERALIN
FMADTHGSRG YKEWWCPVMA NGNTLYGTGQ LPKFEEDLFH TTEGLYLIPT AEVQLTNIHA
GDVLEASQLP LKYCGYTACF REEAGSAGRD TRGLIRVHQF DKVEMVKFAT PEDGFNQLEL
MVEDAENILQ LLGLPYRVIS LCTGDLGFSA AKTYDLEVWL PSYDAYKEIS SCSCCTDFQA
RRANIRYRDP NKFKGTRYVY TLNGSGLAVG RTMAAVMENY QQADGSIKVP DVLVPYMGGV
EVIAADQL