Gene Shel_25950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25950 
Symbol 
ID8396483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2865451 
End bp2866974 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content64% 
IMG OID644987338 
ProductProtein of unknown function (DUF2006) 
Protein accessionYP_003144949 
Protein GI257065277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.311446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACG CGAGAATGAG AAACAAGGCG GAGGACTTCG AGCGCATGGG CATAGACCAA 
AAGATCGTGG CCCCCTGGGA GGACGGCAAG CGCAACGGCG CGCAGCCAGG ATGGATTGAG
TGGTGGTACT TTGACGCCGA CCTCGACGAC GGCACGAAGG TCAACCTGAA CTTTGCCACC
AACCCCGTAA TCGGGAGCCC CGAGGAGGGT TTGCACCCGT TCTTCTACGC CAACGTTCAG
TTCCCCGATG GGCACGAGAT CAACGATTTC GCGTTCCTCG ACGAGGCCGA CTGCTCGTTT
TCCGAGGAGC GTTGCGACGT GAAGATCGGC CCGCACACGT TCAGGGGGGA CCTGGAGACC
TATCAGGTGC ACGTCGAGGA CGTGAAAGGC ATCTCGCTGG ACCTGGTACT GAAGAAGACC
GCCACTTCTT GGCGCCCTGG CACTGCCTAT GTCGACTTCG GCGAGGACTA TGAGAGCTAC
TTCACGTGGT TGTGCGCCGT GCCGCGCGGC GATGTTTCCG GCACGCTCGT GCGCGACGGG
CAGACGCGGC AGGTGCGCGG GCGCGGATAT CACGACCACC AGTGGGCCAC TGGCCTTTTG
CTGAACTTCT GGAACCGGTG GCTTTGGGGC CGTCAGCAAT CGGACGGCTA CACCATCCTC
GTGTTCGACA GCGTGTCCAA TGACGCCACG GGCAACGTGC GCTTCCCCTG GTTCTGCGTC
CAGGACGCGC AGGGCAACGT CGTGTTCGAC AACGTGGAGA TGGGCCCGGG CGTCGACATC
CGGATGGATG GCGAGTTCGT GCTAGAGCAG ACCGGCAAGA CCCTGCCGTC CCACATGGTG
TACCGCTTCG AGCGCGATGG GGTGAAGGTG CGCTACGAGC TGACCGAGCT TCGCTTCCTC
GTGGGCAACG ACCAGTACGC CATGGCGCCC GCCGCCATCC AAGCGGCGTT TCGAAGCGTG
GGCGCGGCGC CCTCCATCTC GCGCCACGCC GCCATCGGCA AGCTCACGAT CGAGCGCCCG
GGCGAAGACC CCCTCGTGGT GGAGGGTGAG ATGCACTACG AGCTGTCCTC GCAGTATCGG
GAATTCATCG TCGACCCGGC AGACCACGTG ACCGAACGCG ACTTGGCGGC GAAGCTTCCG
CTCGTGCCGC AACCCGAGTG GTTCGAAGCG CCCGTTGCCA CGACAGGCCC CGCAGCCTCC
GATATCGACG AGGGAGGGGA GCCCGACCCG GGCTTGGCCG GCTCGTGGGA TTGCACGTTC
GAGGGGCCGA TGGGCAAATC GAACATGAAG CTTGTGCTTG AAGTGGACGG CACCACGCTC
GGCGGGCACA TGGAGATCCT CCGCAAGAAG CAGCCCGTAC AATGGGGCAT TGTAACAGCG
GATGGATTCG AGGCAACCGC GCTCGTGAAG GTGGCTTTCC GAAAGGCCGA GGCGCGCATC
AAGGGCACGC GCGACGGCGA TTCGATTAGG GGCACCGTCG AGCTGCCGAC GGGTTTGGTG
ACGTTTGAGG GAACCCGAGG CTAG
 
Protein sequence
MANARMRNKA EDFERMGIDQ KIVAPWEDGK RNGAQPGWIE WWYFDADLDD GTKVNLNFAT 
NPVIGSPEEG LHPFFYANVQ FPDGHEINDF AFLDEADCSF SEERCDVKIG PHTFRGDLET
YQVHVEDVKG ISLDLVLKKT ATSWRPGTAY VDFGEDYESY FTWLCAVPRG DVSGTLVRDG
QTRQVRGRGY HDHQWATGLL LNFWNRWLWG RQQSDGYTIL VFDSVSNDAT GNVRFPWFCV
QDAQGNVVFD NVEMGPGVDI RMDGEFVLEQ TGKTLPSHMV YRFERDGVKV RYELTELRFL
VGNDQYAMAP AAIQAAFRSV GAAPSISRHA AIGKLTIERP GEDPLVVEGE MHYELSSQYR
EFIVDPADHV TERDLAAKLP LVPQPEWFEA PVATTGPAAS DIDEGGEPDP GLAGSWDCTF
EGPMGKSNMK LVLEVDGTTL GGHMEILRKK QPVQWGIVTA DGFEATALVK VAFRKAEARI
KGTRDGDSIR GTVELPTGLV TFEGTRG