Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_25950 |
Symbol | |
ID | 8396483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2865451 |
End bp | 2866974 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644987338 |
Product | Protein of unknown function (DUF2006) |
Protein accession | YP_003144949 |
Protein GI | 257065277 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.311446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAACG CGAGAATGAG AAACAAGGCG GAGGACTTCG AGCGCATGGG CATAGACCAA AAGATCGTGG CCCCCTGGGA GGACGGCAAG CGCAACGGCG CGCAGCCAGG ATGGATTGAG TGGTGGTACT TTGACGCCGA CCTCGACGAC GGCACGAAGG TCAACCTGAA CTTTGCCACC AACCCCGTAA TCGGGAGCCC CGAGGAGGGT TTGCACCCGT TCTTCTACGC CAACGTTCAG TTCCCCGATG GGCACGAGAT CAACGATTTC GCGTTCCTCG ACGAGGCCGA CTGCTCGTTT TCCGAGGAGC GTTGCGACGT GAAGATCGGC CCGCACACGT TCAGGGGGGA CCTGGAGACC TATCAGGTGC ACGTCGAGGA CGTGAAAGGC ATCTCGCTGG ACCTGGTACT GAAGAAGACC GCCACTTCTT GGCGCCCTGG CACTGCCTAT GTCGACTTCG GCGAGGACTA TGAGAGCTAC TTCACGTGGT TGTGCGCCGT GCCGCGCGGC GATGTTTCCG GCACGCTCGT GCGCGACGGG CAGACGCGGC AGGTGCGCGG GCGCGGATAT CACGACCACC AGTGGGCCAC TGGCCTTTTG CTGAACTTCT GGAACCGGTG GCTTTGGGGC CGTCAGCAAT CGGACGGCTA CACCATCCTC GTGTTCGACA GCGTGTCCAA TGACGCCACG GGCAACGTGC GCTTCCCCTG GTTCTGCGTC CAGGACGCGC AGGGCAACGT CGTGTTCGAC AACGTGGAGA TGGGCCCGGG CGTCGACATC CGGATGGATG GCGAGTTCGT GCTAGAGCAG ACCGGCAAGA CCCTGCCGTC CCACATGGTG TACCGCTTCG AGCGCGATGG GGTGAAGGTG CGCTACGAGC TGACCGAGCT TCGCTTCCTC GTGGGCAACG ACCAGTACGC CATGGCGCCC GCCGCCATCC AAGCGGCGTT TCGAAGCGTG GGCGCGGCGC CCTCCATCTC GCGCCACGCC GCCATCGGCA AGCTCACGAT CGAGCGCCCG GGCGAAGACC CCCTCGTGGT GGAGGGTGAG ATGCACTACG AGCTGTCCTC GCAGTATCGG GAATTCATCG TCGACCCGGC AGACCACGTG ACCGAACGCG ACTTGGCGGC GAAGCTTCCG CTCGTGCCGC AACCCGAGTG GTTCGAAGCG CCCGTTGCCA CGACAGGCCC CGCAGCCTCC GATATCGACG AGGGAGGGGA GCCCGACCCG GGCTTGGCCG GCTCGTGGGA TTGCACGTTC GAGGGGCCGA TGGGCAAATC GAACATGAAG CTTGTGCTTG AAGTGGACGG CACCACGCTC GGCGGGCACA TGGAGATCCT CCGCAAGAAG CAGCCCGTAC AATGGGGCAT TGTAACAGCG GATGGATTCG AGGCAACCGC GCTCGTGAAG GTGGCTTTCC GAAAGGCCGA GGCGCGCATC AAGGGCACGC GCGACGGCGA TTCGATTAGG GGCACCGTCG AGCTGCCGAC GGGTTTGGTG ACGTTTGAGG GAACCCGAGG CTAG
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Protein sequence | MANARMRNKA EDFERMGIDQ KIVAPWEDGK RNGAQPGWIE WWYFDADLDD GTKVNLNFAT NPVIGSPEEG LHPFFYANVQ FPDGHEINDF AFLDEADCSF SEERCDVKIG PHTFRGDLET YQVHVEDVKG ISLDLVLKKT ATSWRPGTAY VDFGEDYESY FTWLCAVPRG DVSGTLVRDG QTRQVRGRGY HDHQWATGLL LNFWNRWLWG RQQSDGYTIL VFDSVSNDAT GNVRFPWFCV QDAQGNVVFD NVEMGPGVDI RMDGEFVLEQ TGKTLPSHMV YRFERDGVKV RYELTELRFL VGNDQYAMAP AAIQAAFRSV GAAPSISRHA AIGKLTIERP GEDPLVVEGE MHYELSSQYR EFIVDPADHV TERDLAAKLP LVPQPEWFEA PVATTGPAAS DIDEGGEPDP GLAGSWDCTF EGPMGKSNMK LVLEVDGTTL GGHMEILRKK QPVQWGIVTA DGFEATALVK VAFRKAEARI KGTRDGDSIR GTVELPTGLV TFEGTRG
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