Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_25890 |
Symbol | |
ID | 8396477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2861536 |
End bp | 2862354 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644987332 |
Product | predicted transcriptional regulator |
Protein accession | YP_003144943 |
Protein GI | 257065271 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCA GCGAGGCCAT CCAGAACGCC CGCAAGGAAG CGGGACTCAC GCAGGAGCAG CTTGCGGCAA AGGTGTACGT GACGCGGCAG GCCGTCAGCC GCTGGGAGAC CGGGGAAAGC GAGCCGAGCA TCGATATGCG CAAGCTCTTG GCAAGCGTCT TGGGCGTGCC CGCAGTGGGC CTGTTCGACC TGCCCGACGC TCCCGCGTGC CAGTGCTGCG GCACCCCGTT CGACGTGCCG AACATGCCCT TCGGCACCAA CGCGGACGGC ACGGAAAACC CCGACTACTG CGGCTGGTGT TACCAGAACG GCGAGTTCAC CGCGGCGGGG CTGGACGAGA CCATCGAGCG CAACGTGCCC TTCCTGATGC AGGCCACCGG CTACACCCAG GAAGAGGCCG TGTCGTTTTT GGGCGCGGTC ATGCCTACAC TGAAACACTG GCGCGACGTT CAGAACAGTA ACGTGGCGGC CAACCTGCGC AGGAGCAAAC TGTACGTATG TCCCGATTGC GGAAACGTCG TATGGTCTGC GGGCGAGGTC GCGGTTCGCT GCTGCAGCAA CGTGCTCGAG CCGCTTGCTC CCGTGGAAAA CGACGGCGTG CTGGACGCTA CGGTGGAACA TGCCGACGGA GTTCAGCGCG TGCGCATTAT CCACCCCATG GCGAAGGACG ACCATTTGAT GTTCATCGCA GCAGTGGGCG ATGACCTGGT GCGCATCAAG CGCCTGTACC CCGAGCAGGA GGCGCGAGCG GAGTTCCCGC TGCAGGGTCG CTGCAAGATT TACGCATTCG GTAAGAGCTG CGGTTTGATC GAGCTTTAG
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Protein sequence | MKVSEAIQNA RKEAGLTQEQ LAAKVYVTRQ AVSRWETGES EPSIDMRKLL ASVLGVPAVG LFDLPDAPAC QCCGTPFDVP NMPFGTNADG TENPDYCGWC YQNGEFTAAG LDETIERNVP FLMQATGYTQ EEAVSFLGAV MPTLKHWRDV QNSNVAANLR RSKLYVCPDC GNVVWSAGEV AVRCCSNVLE PLAPVENDGV LDATVEHADG VQRVRIIHPM AKDDHLMFIA AVGDDLVRIK RLYPEQEARA EFPLQGRCKI YAFGKSCGLI EL
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