Gene Shel_25770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25770 
Symbol 
ID8396465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2848569 
End bp2849957 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content57% 
IMG OID644987321 
ProductMg2+ transporter MgtE 
Protein accessionYP_003144932 
Protein GI257065260 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) 
TIGRFAM ID[TIGR00400] Mg2+ transporter (mgtE) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGA AGAACCAGCA TTTCGACCGC GACCTGGGTA AAATCATGGC GTATCTGGAA 
GAGGGCGCCT ACCTGAAAGC CCGCGACGTG CTTATGAACT ACGTCGCCGC CGACATTGCC
GAGATGCTCG AGGACATCCT GGAAGACCTC GGCATGGACA AGGCCGTGAT CCTCTTTCGA
ATGCTTCCCA AAGACGTGTC CGTCGACGTG TTCTCGTACC TGCCCGGCGA CGACCAGGCC
GACATCATCC AGGCCATCAC CGATCGGGAA ATCTCCTACA TCATGAAGGA ACTGGACTTC
GACGATAAGA TCGACGTGCT CGAGGAGCTG CCGGCCAACA TCGTTTCGAG GATCCTGGAG
AAGACGCCTA GGGACGAACG AAGGCTCATC AACGAATTCC TCAACTATCC CGAGGGCAGC
GCCGGATCGT TGATGACGCC CGAATACATC GCCTTGAGAG ACGATATGAC CGTGGCCGAT
GCCCTGGCCC ACATCAAGCG GGTCGGCATG GACAGCGAGA CCATCTACCT GTGCTACGTG
AAACACGCCG ACAGAAAGCT GGAAGGCATC GTTTCGCTGC GAACGCTGGT CATCTCGGAT
GACAGCAAGC TGGTCAGCGA CCTGATGGAA ACCGACTACG TCTACCTGAA CGTGTACGAC
GACCAGGAAG AGGTCGCGGA GGCCTTCAAG AAGTACGGTT TTCTGGCGAT TCCGGTTGTC
GACAACGAGC ATCGGCTGGT TGGCATCATC ACCGTCGACG ACGTCATGGA CGTCATCGAG
GAAGAGACCA CCGAGGACAT CGAGCGCATG GTCGGCGTTA TGGGCGACGA CGAGCGCAAG
AAGTACCTGG ACCTGGGTGT GTTCCGCCAT GTGAAAAACC GCTTGCCGTG GCTGCTCTTC
ATGACGGTCG CCCTTATGGT CACGGGCAGC CTCATCAACC AGTTCGAATC CGTCCTGTCG
CAAGTCATCG TGCTGGTTGG CTATCTGCCT CTGCTCATGG GAACGGGCGG CAACACAGGC
ACACAGACGG CGACCCTCAT CATCCGCGGA CTTTCCTTGG ACGAAGTCGA CCTCAAGGAC
ATCTTCAAAG TCCTCTGGAA GGAACTGCGC GTGAGCATCT GCCTGGGCGT CGTGCTCAGC
GCCTTCAATT TCCTGAAGAT CATCCTGATC GACCAGCAGC CCCCGCTGAT CGGACTCACC
GTCGCCATAT CCATGATCCT GGTCGTCATG TTCGCGAAGC TGTTCGGCGG CACCCTTCCC
ATGGCTGCGA AGAAAATCGG CGTCGACCCC GCCCTTATGG CCACCCCGAT GATCTCCTCC
GTTACGGACA TGGTTTCTTC GGTCATCTTC CTCTTCACCG CATCGATCCT GCTGGGCATT
GCAATTTAA
 
Protein sequence
MDTKNQHFDR DLGKIMAYLE EGAYLKARDV LMNYVAADIA EMLEDILEDL GMDKAVILFR 
MLPKDVSVDV FSYLPGDDQA DIIQAITDRE ISYIMKELDF DDKIDVLEEL PANIVSRILE
KTPRDERRLI NEFLNYPEGS AGSLMTPEYI ALRDDMTVAD ALAHIKRVGM DSETIYLCYV
KHADRKLEGI VSLRTLVISD DSKLVSDLME TDYVYLNVYD DQEEVAEAFK KYGFLAIPVV
DNEHRLVGII TVDDVMDVIE EETTEDIERM VGVMGDDERK KYLDLGVFRH VKNRLPWLLF
MTVALMVTGS LINQFESVLS QVIVLVGYLP LLMGTGGNTG TQTATLIIRG LSLDEVDLKD
IFKVLWKELR VSICLGVVLS AFNFLKIILI DQQPPLIGLT VAISMILVVM FAKLFGGTLP
MAAKKIGVDP ALMATPMISS VTDMVSSVIF LFTASILLGI AI