| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25280 |
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| Symbol | |
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| ID | 8396416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2796435 |
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| End bp | 2799170 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644987273 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_003144884 |
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| Protein GI | 257065212 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0556633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACA AGAAGATGAA CGTCAACGTT ACCATCGATG GCATCCAGCT TTCGGTACCT
GAGGATTTCA CCATCCTGGC AGCCGCCAAG AAGGCCGGCA TCCGCATCCC GACGTTGTGC
TTCATGAAGG ACGTCTCCGA CATCGGCATG TGTCGCGTCT GCAGTGTCGA AGTCGAAGGG
CAGGACAACC TGGTCGCCGC GTGCAAGACG CCGGTGGCCG AAGGTATGGA GGTGCGCACC
TCCACCGAGC GCGTCCAGTC CTACCGTAAA ATGATGCTCC AACTGGTGCT TGCCGAGCAC
GGCCTCGATT CGACCAACTA CTGCTTCAGC TGCGCCAAGA ACGGTGTCTG CGAGCTGCAG
AACATCTGCC GCGAGCTGGG CGTGACCGAA TCCGCCTTCG CTCCCGAGAA GCCCAAGGCC
CGCAAGCCCA TTCTGGATTC GAACCCGTTC TTGTCGTTCG ATCCCAACCT GTGCATCCAG
TGCCAGCGTT GCGTGGGCGC CTGCAACAAC CAGGCCCACA ACCATACGCT GCAGACGGGC
AAGAAGGGCC TTCGCACGAA GATTCTGGCT CCCTTCGGAC CTGATTGGAA GGCGACCACC
TGCGAGAGCT GCGGCAACTG CGCCCAGGCG TGCCCGACGG GCGCCCTTAC CCTGAAGCGC
CGCAAGCAGT ACCGCGAGTG GGAGGTCACC AAGACCCGCA CCACGTGCCC GCATTGCGCT
GTGGGCTGCC AGCTTGACCT GGTGGTTAAG GACGGCGTCA TCGTTGATGC CGAGGCGGCG
CCCGGTCCTT CCAACCGCGC CATGCTGTGC GTCAAGGGCC GTTCGGGGAG CTTCGACTTC
GTCCACTCGC CCGACCGCAT CACCACGCCG CTGGTCAAGA ACAAGCTGAC CGGCGAATTT
GAGCCTGCCA GCTGGGATGA CGCTCTGAAT CTGGTGGCAA GCAAATTCAC GGAGCTCCGA
GATGAGTTTG GAGGTGACGC GCTGGCGGCC TTCGCATGTT CCCGTTCCAC CAACGAGGAC
GTGTACATGC TCATGAAGAT GGCCCGCACG GTGTTCAAAA CGAACAGCGT TGACAACTGC
GCACGTGTTT GACACGCTCC GACGGTCGCC GGTCTGGCGA TGACTCTCGG TTCTGGTGCG
ATGACGAACA CCATTGAAGA TATTACGCAA GCCTCCGACG TCATCATGTT GGTTGGCAGC
AACCCCGAAG AAGCGCATCC TGTGCTCGGC ATGCAGGTAC GCAAGGCCGT TGAGAACGGC
ACGAAACTCA TCTTGGTCGA CCCCCGCGAC ATCGGTTTGG CCAAGTACGC CGATATCCAC
CTGAAGCTGC GCCCCGGCAC CAACGTCGCC TTCGCGAACG GCGTGGTGCA TATCCTGATC
AAGGAAGGTC TGGTCGACGA AGAGTACGTG GCCAGCCGCA CCAGCGGCTT CGAGGAGCTG
GCGAAGATGG TCGAGAGCTA CACGCCTGAG CGTGTCGCGG AAATCTGCCA TATCGACGTG
CGCGACCTGA TTGCAGCCGC CAAGCTGTAC GGCAGCGCCG ACGCCGCTCC CATCATGTAC
TGTCTGGGTG TTACGGAGCA TTCCACCGGC ACCGAAGGCG TCATGAGCCT GTCCAACATC
GCGATGGTCA ACGGCAAGCT GGGCAAACCC GGCTGCGGCG TGAACCCCAT CCGCGGTCAG
AACAACGTGC AGGGCGCCTG CGACATGGGT GCTCAGCCCA ATACCTTCAC GGGCTACCAG
AAGGTCGCAG ACCCAGCCGT GGTCGAGAAG TTCGAAAAGG CGTGGGGAAC CTTCCTCAAT
CCCAACGAGG GTACGAAGGC CACAGAGGTG TTCCCGGCCG CCATCGAGGG CCGCATCAAA
GGTCTGTACC TGTTCGGCGA GGACCCAGTT CGTACCGATC CCGACACGAA CCACGTGATC
AAGGCTCTGA CCAGCCTGGA CTTCTTCGTG GTTCAGGAAC TGTTCATGAC CGAGACTGCC
AAGCTGGCCG ACGTCATTCT GCCTGGCCGC AGCTTTGCGG AAAAGGAAGG CACGTTCAGC
AACACCGAGC GCCGCGTGCA GCGCGTGCGC AAGGCCGTGA ACGGACCCGC CGGCCCGCAG
CTTGATACCT GGATCTTCAC GGAGATCATG CAGCGCATGG AATACGACCA GCCGCATCTG
ACCGCATCCG AGATCATGGA CGAGATATCG TCGCTCACCC CGAGCTTCGG CGGCATCACC
CATGCTCGCC TGGACAGCGC GGAGGTCGAC GGTCGCGGCC TGCAGTGGCC CTGCCCGACG
CCTGAGCATC CTGGCACGCC CATCATGCAT GTGGGCAAGT TCGCCAAGGG CCTCGGCACG
TATTCTACGG CCGAGTACCG GCCCAGCGTG GAGCTGCCGG ACAAGGAGTA TCCGCTCATG
CTCACGACGG GCCGCATCCT GTATCACTAC AACGCCTGCG CCATGACGGC CCGCACCGAA
GGGCTCAACG AGATCGCCAA CAGCTCGTTC ATCGAAATCA ACACGGCCGA TGCCGAACAG
CTCGGCATTG CTGACGGCGA TCGCGTCAAG GTGGAGTCGC GTCGTGCGGC CATCGAGTCC
ACGGCCCGCG TGTCCGACAA GACGAATCCG GGCGAAACCT GGATGCCGTT CCACTTCCAG
GACGGCAACA GCAACTGGCT CACCAATGCC GCGCTTGACA ACATCGCCAA GGCGCCTGAG
TTCAAGGTCT GCGCCATTCG CGTCGCGAAG GCGTAA
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| Protein sequence | MSNKKMNVNV TIDGIQLSVP EDFTILAAAK KAGIRIPTLC FMKDVSDIGM CRVCSVEVEG
QDNLVAACKT PVAEGMEVRT STERVQSYRK MMLQLVLAEH GLDSTNYCFS CAKNGVCELQ
NICRELGVTE SAFAPEKPKA RKPILDSNPF LSFDPNLCIQ CQRCVGACNN QAHNHTLQTG
KKGLRTKILA PFGPDWKATT CESCGNCAQA CPTGALTLKR RKQYREWEVT KTRTTCPHCA
VGCQLDLVVK DGVIVDAEAA PGPSNRAMLC VKGRSGSFDF VHSPDRITTP LVKNKLTGEF
EPASWDDALN LVASKFTELR DEFGGDALAA FACSRSTNED VYMLMKMART VFKTNSVDNC
ARVUHAPTVA GLAMTLGSGA MTNTIEDITQ ASDVIMLVGS NPEEAHPVLG MQVRKAVENG
TKLILVDPRD IGLAKYADIH LKLRPGTNVA FANGVVHILI KEGLVDEEYV ASRTSGFEEL
AKMVESYTPE RVAEICHIDV RDLIAAAKLY GSADAAPIMY CLGVTEHSTG TEGVMSLSNI
AMVNGKLGKP GCGVNPIRGQ NNVQGACDMG AQPNTFTGYQ KVADPAVVEK FEKAWGTFLN
PNEGTKATEV FPAAIEGRIK GLYLFGEDPV RTDPDTNHVI KALTSLDFFV VQELFMTETA
KLADVILPGR SFAEKEGTFS NTERRVQRVR KAVNGPAGPQ LDTWIFTEIM QRMEYDQPHL
TASEIMDEIS SLTPSFGGIT HARLDSAEVD GRGLQWPCPT PEHPGTPIMH VGKFAKGLGT
YSTAEYRPSV ELPDKEYPLM LTTGRILYHY NACAMTARTE GLNEIANSSF IEINTADAEQ
LGIADGDRVK VESRRAAIES TARVSDKTNP GETWMPFHFQ DGNSNWLTNA ALDNIAKAPE
FKVCAIRVAK A
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