Gene Shel_25140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25140 
Symbol 
ID8396402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2780779 
End bp2781996 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content59% 
IMG OID644987259 
Productglycosyltransferase 
Protein accessionYP_003144870 
Protein GI257065198 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACATCC TCCATGTTAG CGCCCAGCGA CCCGACAGTA CGGGAAGCGG CATATACCTC 
AGGGAAACCG TAGGGGCTCT AGAATCTCAA GGGCATCGTC AAGCCGTCGT CGCAGGCGTC
GGCTTAGGCG ATGCCTCACC TTTTTCAGAT GACATTCTTT TCGAACCGGT GCGGTTCGAA
AGCGATGCGT TGCCGTTCCC GGTTGTGGGC ATGTCCGACG TCATGCCTTA CGCCTCGACG
CGGTACCGCG ACCTCACGCC CCAGATGGCC TCTCAATTCA AGGACGCCTT CACCAAGGCT
TTTGATCATG TGTTTGCGCA GTTCAAACCT GATATTGTGA TCTGCCACCA TCTATATCTC
GTTTGCAGCG TGCTTGCGGA TTGGTTTGAA CGCCACCCTG AAGACCGTGC GCGGTGCTCG
TTTAGAGGCG CGTGCCATAA CACCGATCTG AGACAGTACG AGTCCCATGG ACTCGAGCGG
GAGGCCATCA ACCGGGCGGT TCGCTCCCTC GATGTGATCT TCGCGCTTCA CGGGGAACAG
GCGAAGGAAA TCGCCTTGAT GCACGGCATC GACCCCGCGA AGGTCCGCGT GTCCGGCATC
GGCTACAACG ACGCCCTGTT TGTCGAGGAC CCTTCCCGGC GCGACGATTC CGGCTGCCGG
ATGGTGTATG TGGGCAAGCT CTGGAAACAA AAAGGGCTCA TGGAGCTGTT CGGCGCCATG
GACCTTTTGG AAAGTCGCGA CACGAGGGAC TTATGTCTCG AATTGATCGG CGGGTATAGC
AATGAGACCG AGCGCGACGA GATCATGGCG CGTGCGGAAT CCTGCCAAGT GCCGTCGGTT
TTCGCCGGCC AGATGAACCA AGAACTCGTC AGGAACGAGT ACCAGCGGTC CGACGTCTTC
GTGCTTCCAT CGTTTTCCGA GGGGCTCCCG CTGGTGAGCG TCGAGGCGCT CGCTTGCGGC
TGCAAGGTGG TTATGACGGA TTTACCTGGG CTTCGAGAAT GGTTCGACAT GTATATTCCC
GATGCGCCCC TGTGGCTTGT GGAACTTCCC GAGCTCATAA AGGATGGATC GTGGCGGATT
GCGAACGACG AGTCAAGGGC TCGTTTCGAG CGGAATCTGG CCGATGCGCT TTCCGAGGCG
ATCGAAGCCG AGCATCGTCC GTGCGACTTG TCTCAGCTGT CTTGGGGCGC CTTGGCCCAG
AGGCTCATCG CCGACTAG
 
Protein sequence
MNILHVSAQR PDSTGSGIYL RETVGALESQ GHRQAVVAGV GLGDASPFSD DILFEPVRFE 
SDALPFPVVG MSDVMPYAST RYRDLTPQMA SQFKDAFTKA FDHVFAQFKP DIVICHHLYL
VCSVLADWFE RHPEDRARCS FRGACHNTDL RQYESHGLER EAINRAVRSL DVIFALHGEQ
AKEIALMHGI DPAKVRVSGI GYNDALFVED PSRRDDSGCR MVYVGKLWKQ KGLMELFGAM
DLLESRDTRD LCLELIGGYS NETERDEIMA RAESCQVPSV FAGQMNQELV RNEYQRSDVF
VLPSFSEGLP LVSVEALACG CKVVMTDLPG LREWFDMYIP DAPLWLVELP ELIKDGSWRI
ANDESRARFE RNLADALSEA IEAEHRPCDL SQLSWGALAQ RLIAD