Gene Shel_25130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25130 
Symbol 
ID8396401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2779339 
End bp2780448 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content63% 
IMG OID644987258 
Producthypothetical protein 
Protein accessionYP_003144869 
Protein GI257065197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.917917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTC TCAATTCTAA ACAGGGACTT ATCGTAGCCG GTCTGATTGT CGGCGCGTTG 
ACCGCGGTGC TCGCCGCAAC GGGCAATCCG GCGAACATGG CGATCTGCGC TGCATGCTTC
ATCCGCGACA TGGCGGGTTC GATGTATTTG CATACTGCCG CTCCCGTTCA GTATTTCAGG
CCTGAAATCG TCGGCTTCGT CGCGGGCTCG TTCCTGATCG CCGTTGCGAC CAAGGAGTAC
CGCTCCACCG CAGGCTCCTC GCCGATGATC CGTTTCGTGC TGGGCTTCAT CATGATGCTC
GGCGCCCTCG TCTTCCTGGG CTGCCCCCTG CGCATGGTCA TCCGCATGAG CGCCGGCGAC
CTCAACGCCT GGGTTGCTCT TATCGGCCTT GCAGCCGGTG CCATCACCGG TGCCGTGTTC
CTGAAGCAGG GCTTCTCCCT GGGTCGTGAG GTCGACACCA ACAAGGCCAC TGGTGCCGTG
CTTCCGATTA TCCTGGTTGT CCTGCTCATC ATCGGCCTGG CTACCGGTGC CTATGCCGCA
AGCGAGAAGG GTCCTGGCTC CATGCATGCC CCCGTGGCCG TCGCTCTGAT CGTCGCCCTG
GTCATCGGCG CCATCGCCCA GAAGACCCGC ATCTGCTTCG TCGGCGGCAT CCGCAACCTG
TTCCTCATGA AGGACTACAC GCTGCTGCTC CCCATCGCCA GCTTGTTCGT GGTCATGTTG
GTCTTCAACA TCGCTACCGG CGGCTTCAAG GCAAGCTTCG ACGGCCAGCC GATCGCTCAC
TCTCAGCACA TCTGGAACAT CCTTGGCCTG TATGCCGTCG GCTTCGGCGG CGTGCTCGCC
GGTGGCTGCC CGCTGCGCCA GATGGTTTTG GCCGGCCAGG GTTCCAGCGA CGCTGCCATC
ACGTTCGTCG GCATGCTCGT CGGCGCTGCG TTCGCCCACA ACTTCGGCAT CGCCTCCGCT
GCTGCAGCTG CTGCAACCGC TGAGACCGAA GCTGTCGTCG GCGGCCCCAC CATCGTCGGC
CAGGTCGTTC TGGTCGCCAG CATCGCCGTG CTGTTCATCA TCGCGGTGAC CAACCTGCGC
AAGAGGAAGG TCGTTGCCAC CGCTGAATAA
 
Protein sequence
MDFLNSKQGL IVAGLIVGAL TAVLAATGNP ANMAICAACF IRDMAGSMYL HTAAPVQYFR 
PEIVGFVAGS FLIAVATKEY RSTAGSSPMI RFVLGFIMML GALVFLGCPL RMVIRMSAGD
LNAWVALIGL AAGAITGAVF LKQGFSLGRE VDTNKATGAV LPIILVVLLI IGLATGAYAA
SEKGPGSMHA PVAVALIVAL VIGAIAQKTR ICFVGGIRNL FLMKDYTLLL PIASLFVVML
VFNIATGGFK ASFDGQPIAH SQHIWNILGL YAVGFGGVLA GGCPLRQMVL AGQGSSDAAI
TFVGMLVGAA FAHNFGIASA AAAAATAETE AVVGGPTIVG QVVLVASIAV LFIIAVTNLR
KRKVVATAE