Gene Shel_25010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25010 
Symbol 
ID8396389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2767064 
End bp2768518 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content61% 
IMG OID644987246 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003144857 
Protein GI257065185 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCG TTGATGAGAA TGTGAAAGAG AACGATCCGT TGAAGTCCCT GTCGTTCAGG 
ATGCCGACCA TTCCTTTGGA GTTTCTGGGG CTTGGCGTGT ATCGAGCTTG GATCGAAATC
GGCTTCGTCG GAAGCTTCGT TCCTTATCCC GATACTGGAT TCGCCACGCA CGACCTGTTC
GACATGGCGC TGGCTGCAAT GCTTCTGATT TGGGCCGCGC TGTCACGCCG GGTGGGGCCG
TTTTTCCAGA AGCGCTGGCT GTTCGCGCTG TGCTGCGCCA CCATGACCCT TTCGACCTGC
GCCATGTTCT GCTCGCTGTG GCTGCCCGAT CATGCGTTGC TGCTGGAGGC TGCCGGCGCT
TTGCTCGGCG GTGTGGGCAC GTCCGTCATG ATTCTCATGT GGAGCGAACT GTACGGATGT
TTGAACCCGC TTCGCGTGGC GCTTTACTAC TCCTGTTCCA TCTTGGTGGG CGCGATCATC
GTATACGTGT ACCGAGGCTT CCAATTCCCG TGGCTGTTCG TCATGACGGC GATTCTTCCC
GCCGTGGCGC TGTTCGCCCT CCAGCGTTCG TTTGGGAAGG TGCCCGAGCC CGAGCGTCCG
TCCTCGTCAT GGGTGAGTTT CTCGGTTCCG TGGCGCGCCA TCCTGCTGAT GGCCTGCTAC
GCGTTCGCGT ACGGCACGCT GGAGCCGACG CTGTACGGCA GCGGCATGTT CGGAGCCCAT
TCGGCGCCGG GCACCGTGCT GGTTGCGCTG GTGGTGCTTG TCGGCGTCAC GCTTCAGGGG
AGGAAGTTCG ATTTCAACAT CATATATAAG ATGGGGTTGC CGCTCATGGT GGCGGCGTTT
CTGCTCATTC CCATCTTCGG GTATTCGGGA ACCGTGGTCA GCAACGTCTG CGTGGCGGGC
GCCTATACGG GCCTGAGCAT CCTGATCATG CTCATTTGCG CGAACATCTG CTATCGGTAC
GGGGTGTCCG CCGTGTGGCT GTTCGGCATC GAGCGCGGCG TGCGTCTGCT GTGCATGTTC
GCCGGTCGTC AGCTGGCAGC CGCAGGGCAT GTTTTCGCGG TCGGGTCTGT TTCCGGCGAC
ACGGCAGTGG CGTTTCTAGC CATTGCGGCC GTGGTCATGG GCTCGTTCGT GTTCCTTTCT
ACCAGGGATT TCGGCGGAAC CTGGGGTGCG ACGTTTCTCG ACGGCGGCAC CGAGGACGCC
GAGCTGCTGC GCAAGCAGGA GATCGCCGAC CGTTGCAACG CCGTTGCGAC GGAACACGGC
CTGACCGCCC GAGAGACCGA GGTGTTGCTT TTGCTGGCCC AGAAGAAGAC CGTATCCGCC
ATCGAGGAGG AGCTGTTCAT CGCGAACGGA ACCGCAAAGG CCCACGTTCG CCATATCTAC
CAGAAGATAG GCATCCACTC CCGCGAAGAA CTGTTCGACG TGCTAGGCAT CGACGGCCTG
AGCCCCATCT CGTAA
 
Protein sequence
MSSVDENVKE NDPLKSLSFR MPTIPLEFLG LGVYRAWIEI GFVGSFVPYP DTGFATHDLF 
DMALAAMLLI WAALSRRVGP FFQKRWLFAL CCATMTLSTC AMFCSLWLPD HALLLEAAGA
LLGGVGTSVM ILMWSELYGC LNPLRVALYY SCSILVGAII VYVYRGFQFP WLFVMTAILP
AVALFALQRS FGKVPEPERP SSSWVSFSVP WRAILLMACY AFAYGTLEPT LYGSGMFGAH
SAPGTVLVAL VVLVGVTLQG RKFDFNIIYK MGLPLMVAAF LLIPIFGYSG TVVSNVCVAG
AYTGLSILIM LICANICYRY GVSAVWLFGI ERGVRLLCMF AGRQLAAAGH VFAVGSVSGD
TAVAFLAIAA VVMGSFVFLS TRDFGGTWGA TFLDGGTEDA ELLRKQEIAD RCNAVATEHG
LTARETEVLL LLAQKKTVSA IEEELFIANG TAKAHVRHIY QKIGIHSREE LFDVLGIDGL
SPIS