Gene Shel_24880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24880 
Symbol 
ID8396376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2754554 
End bp2755138 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content64% 
IMG OID644987234 
ProductGTP cyclohydrolase I 
Protein accessionYP_003144845 
Protein GI257065173 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CCGAATATCG GAAGCTTGAC CAGCCGCGCG CCGAGGCGGC CATCCGCGAG 
TTTCTTTACG CCATAGGCGA GGACCCCGAT CGCGAGGGAC TGCTCGAGAC GCCGTCTCGG
GTGGCCCGCG CCTGTGCGGA GATTTTCGCC GGGTTGCAAG AGAACCCTGC GGACCACCTG
AAGAAGCAGT TCCACGAGGC CGACCATGAG GAAATGGTCA TCGTGAAGGA CATCCCCTTC
AACTCCATGT GCGAGCACCA TCTGCTGCCG TTCAGCGGGC GTGCGCACGT GGCCTACATC
CCGCGGAAAG GCCGCATTAC GGGCCTGTCG AAGATCGCCC GCTGCGTGGA GGGTTTCGCC
CGGCGTCCTC AGGTCCAGGA GCGTCTGGCG TCTCAGGTGG CGGACGCCTT GATGGAAGCA
TTGGATCCGC TGGGCGCCAT CGTGGTCATC GAGGCCGAGC ACATGTGCAT GACCGCTCGG
GGCATCCGCA AGCCTGGGTC GCTAACCGTG ACGAGCGCCG TGCGCGGTGT GTTCAAAGAG
GACCAGAAAA CCCGCGCCGA GGCTCTAGCC CTATTCAGGG ATTAG
 
Protein sequence
MTESEYRKLD QPRAEAAIRE FLYAIGEDPD REGLLETPSR VARACAEIFA GLQENPADHL 
KKQFHEADHE EMVIVKDIPF NSMCEHHLLP FSGRAHVAYI PRKGRITGLS KIARCVEGFA
RRPQVQERLA SQVADALMEA LDPLGAIVVI EAEHMCMTAR GIRKPGSLTV TSAVRGVFKE
DQKTRAEALA LFRD