Gene Shel_24720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24720 
Symbol 
ID8396360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand- 
Start bp2737840 
End bp2738928 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content58% 
IMG OID644987218 
ProductABC-type Fe3+-siderophore transport system, permease component 
Protein accessionYP_003144829 
Protein GI257065157 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAAG GCGACGTGCC TGTCCGGTCC CGAGAGAAGC GCTCCGAAGG ACCGAAGGCT 
TCAGGAAGGA ACGCAGCGCA TCTTCCGCTG CCGGTCATCC TTACCGTTTG CGGCATCTTA 
GTGGTTGTCT TGGGCATCGT ATCAATGTGC GTGGGACGCT ACGAAGTGGA CATTCAGACC 
ACCATAGCCA TTCTGGCATC GAACTTCCCG TTTCTCGACG TTGAAGAGGT ATGGACTGCC 
AACCAATACA ACGTCATCAT GAACATACGC CTGCCCCGCG TGGTAGCTGC GGCGTTGGTG 
GGCTCGGCAT TGGCTCTGTC GGGCGCTTCG TATCAGGGCG TGTTTCAGAA TCCGCTGGTG 
TCGCCGGACA TCCTGGGCGT AAGCTACGGG GCCTGCGTAG GTGCGGCGCT GTCCATTCTT 
CTGTATATGG ACCAGTGGAT GACGCAGGTC TTCGCTTTCG TGCTCGGCCT GATCACCGTG 
TTCATAACCG TCTCCATTCC CAAATTCATG CATAAGCACA CCAACGTGAT GATGGTGCTT 
TCAGGCGTCA TTGTGGGTGG CTTCATGTCA TCGGTGCTGG GTCTCATGAA ATATGTCGCC 
GACCCCGATA CCCAACTTGC GGAAATCACG TACTGGCAGC TGGGTTCCAT CGCGAAGGTG 
GATTTCGAAT TGTTGAAAAC CACCGCACCT GTCATGGTTG TGGCGGCAAT CGTGCTTATT 
GCCATGCGTT GGCGGTTGAA CCTGCTGTCG CTGGGTGAAG ACGAGGCGCG ATCTTTGGGC 
GTGGACCTGA GGCGCGAGCG CAACGTCGTC ATCGTTGCGG CCACCGTGCT GACGGCGAGC 
GCCGTTTCGG TTGCCGGCAC CATCGGATGG GTCGGCCTGA TCATTCCGCA CGTGGCGCGG 
CGCATCGTGG GTGCCGACAA TAAACGTCTC ATACCCACGG TGGTGTTCGT GGCGGCGGCG 
TTCATGATCC TGGTGGACCT GCTTGCCCGC AACATATCCG GTTTCGAGAT ACCGCTCGGC 
GTGCTGACGG GCCTCATAGG CGCGCCGCTG TTCGGCTACA TCCTGGTCAA GCAGAGGGAG 
GTGGACTGA
 
Protein sequence
MVKGDVPVRS REKRSEGPKA SGRNAAHLPL PVILTVCGIL VVVLGIVSMC VGRYEVDIQT 
TIAILASNFP FLDVEEVWTA NQYNVIMNIR LPRVVAAALV GSALALSGAS YQGVFQNPLV 
SPDILGVSYG ACVGAALSIL LYMDQWMTQV FAFVLGLITV FITVSIPKFM HKHTNVMMVL 
SGVIVGGFMS SVLGLMKYVA DPDTQLAEIT YWQLGSIAKV DFELLKTTAP VMVVAAIVLI 
AMRWRLNLLS LGEDEARSLG VDLRRERNVV IVAATVLTAS AVSVAGTIGW VGLIIPHVAR 
RIVGADNKRL IPTVVFVAAA FMILVDLLAR NISGFEIPLG VLTGLIGAPL FGYILVKQRE 
VD