Gene Shel_24670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24670 
Symbol 
ID8396355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2733282 
End bp2735075 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content65% 
IMG OID644987213 
ProductNADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
Protein accessionYP_003144824 
Protein GI257065152 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACG GCACCGAGAA GATCCTTGTC TGCTGCGGCA CGAGTTGCAT CGCCAACGGC 
GCCCTGGACG TGGCAGACGC CATCGAGCAG GAACTTGCCG CCCGCGGCAT AAACGGCGTG
GAGGTTTGCG TCACCCGCAC GGGCTGCTCC GGCGAATGCG AGCAGGGACC CATCGTCCGC
TTCATGCCCC GCGACCTGAT GTACTACCGC GTGACCGTGC GCGACGCAGC CGCCATCGTG
GATTCGCTTG AAGGCGAACC CGTTAAGAAG CTCCTGTTCA AGAAAGACAA GCAGTTCTTC
GAGCACATGG ACGACAACCC GTTCTACGCC CTGCAGCACA AAGTCGTGCT CAAGGACGTG
GGCATCATCG ACCCGCTGTC GCTGGACGAC TACATCGCCC GCGGCGGCTA CGAGGGCCTG
AAGCGCGCCC TTAAGATGAC CCCCGACGAG ATCATCACCG AGGTCGAGAA GAGCGGTCTG
CGCGGCAAAG GCGGCGCAGG CTTCCCCACC GGGCGCAAGT GGCGCACCGC CGCCGGCTAC
GACGTGTTCC CCAAATACAT CGTCTGCAAC GGCGACGAAG GCGACCCCGG AGCATTCATG
GACGGCTCTA CCATGGAGGG CAGCCCCCAT GCCGTGATCG AGGGCATGAT CATCGGCGCG
TTGGCCATCG GGGCCGAAGA GGGCGTACTC TACATCCGTG ACGAGTACGC ACTGGCCCGC
GACCACATCC AGCACGCCAT CGACGACGCC TATGCGGCGG GCATCCTTGG CGAATCCATC
CTGGGCACCG ACCACAAGCT GGACCTTTCC ATCGTCCGCG GCGGCGGCGC CTTCGTCTGC
GGCGAATCAA CCGCACTGAT GGCATCCATC GAAGGCCGCG TGGGCGAGCC CCGCGCGAAA
TACATCCGCA GCGTCCAGCG CGGCTTGTTC GACAACCCCA CGGTTCTGAA CAACGTGGAG
TCGCTGGCAT CCATCCCCAC CATCCTGCGG GACGGCGGCG AGAAATACGC CGAAATCGGC
ACCGACAACT CCAAGGGCAC CAAGGTGTTC GCTATGGTCG GCAAGGTCAA GCACACGGGC
CTTGTGGAAG TTCCCATGGG AACCACGCTG CGCACCCTGA TCTACGACAT CGGCGGCGGC
ATCATCGGAG ACCGCCCGTT CAAGGCCATT CAGACCGGCG GTCCTTCCGG CGGCTGCATC
CCCGAAGAGC TGCTGGATCT GCCCGTCGAC TTCGACACCT TGGTGGAATA CGGCGCCATG
ATGGGATCCG GCGGCATGAT CGTCATGGAC GACCGCTCCT GCATGGTGGA AGTGGCCCGT
TACTACGTGG ACTTCCTCTG CGAGGAGAGC TGCGGCAAAT GCACGCCGTG CCGCGAGGGT
TTGCGCCAGA TGCGCGCCAT CCTGACCGAC ATCTGCGAAG GCCGCGGCAA ACCCGGCGAC
ATCGAGCTTT TGGAGCGCAT CGGGCACACC ATGCAGGACG CATCCCTGTG CGCACTGGGC
CGCACCGCCC CGAACCCTGT TCTGACCACC ATCAAGTTCT TCCGCGACGA ATACGAGGCG
CACATCGACG GGAAGGAATG CCCTGCCGGC GTCTGCGCCA AGCTGACCCA GTTCGCCATC
GAACCGGAAG CCTGCACGGG CTGCGGCATG TGCATGCGCG CTTGCCCCGC CGGCGCCATC
TCCGGCGACC GCCGCGAGCC GCACGTCATC GACCCGCACC TGTGCATCGC CTGCGGCAGC
TGCCGTGAGG CCTGCCACTT CGACGCGGTG CTGACCGAAA GGAGGCCCGC ATGA
 
Protein sequence
MINGTEKILV CCGTSCIANG ALDVADAIEQ ELAARGINGV EVCVTRTGCS GECEQGPIVR 
FMPRDLMYYR VTVRDAAAIV DSLEGEPVKK LLFKKDKQFF EHMDDNPFYA LQHKVVLKDV
GIIDPLSLDD YIARGGYEGL KRALKMTPDE IITEVEKSGL RGKGGAGFPT GRKWRTAAGY
DVFPKYIVCN GDEGDPGAFM DGSTMEGSPH AVIEGMIIGA LAIGAEEGVL YIRDEYALAR
DHIQHAIDDA YAAGILGESI LGTDHKLDLS IVRGGGAFVC GESTALMASI EGRVGEPRAK
YIRSVQRGLF DNPTVLNNVE SLASIPTILR DGGEKYAEIG TDNSKGTKVF AMVGKVKHTG
LVEVPMGTTL RTLIYDIGGG IIGDRPFKAI QTGGPSGGCI PEELLDLPVD FDTLVEYGAM
MGSGGMIVMD DRSCMVEVAR YYVDFLCEES CGKCTPCREG LRQMRAILTD ICEGRGKPGD
IELLERIGHT MQDASLCALG RTAPNPVLTT IKFFRDEYEA HIDGKECPAG VCAKLTQFAI
EPEACTGCGM CMRACPAGAI SGDRREPHVI DPHLCIACGS CREACHFDAV LTERRPA