Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_24460 |
Symbol | |
ID | 8396334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2711048 |
End bp | 2712265 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644987192 |
Product | ABC-type Fe3+-hydroxamate transport system, periplasmic component |
Protein accession | YP_003144803 |
Protein GI | 257065131 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAAGA CGATGCATGC GACGCTATGC TGTCTGATGC TTGCAGGGTT GCTGTGCTTC CTGCCGGCTT GCTCTGCTGA ACCTACCGAA CCGGCATCGA CCGCGGGTGC ATCTAACACT GCGAGTGTTG CGACGGATGC GTCCGCGGAT GCTGCCGACG AGCCGACATT CCACAACGCC GATTTGGGGA ATGACTGGAA AGTCGTGGAC AGCCTGGACC TTCAGTACGC CACGGGATTT ACCGTTGATT ATTACGAGGG AGGGTATAAG CTGGCCTGTC TTTCTGACGG CGGGCGCTAT CTGACGGTGC CCGAAGGCGC GTCTGCGCCC GAAGGCATCG ACGCAGATAT AGTTGTGCTT CAGCAGCCGA TCGACCACGT GTATTTGGTT GCTTCTGACA CCATGTGCCT TTTTGACGCG TTGGATGAAA TGGACGCTAT TGCGGTTTCG GGCATAGCGA AGGAAAACTG GCATATCCCG GCCGCAATAG AGGCTATGGA GAATGGGTCC ATCGTTTACG GCGGGAAATA CTCGGCACCC GATTACGACA CCTTGTTGGC GCAAGGATGC GAGCTATCCA TCCAGTCGAC CATGATCAAC CATACCCCGG ACGTGCGCGA GAAGCTTATC GAACTGGGAA TCCCTGTACT GACCGAACAG TCGAGCTACG AAAGCGAACC ATTGGGCCGC ACTGAATGGA TCAAGCTGTA CGGCGCCTTG TTCGACAAAG AGGATGTCGC GGCAAAGCTT TTCGACGCGC AGGTCGAAAA GGCCCAATCG GCAATCGGAA CCGAAACGGG AAAGACCGTA GCTTTCTTCT ATATCAACAG CAATGGTGCG GCGGTAGTGC GCAAGCCGGG CGACTATGTA ACGAAGATGA TTTCACTGGC GGGCGGCGAC TATGTATTCA GCGATTTGGG CGACGATTCT GCGACGTCCA CGGTCACTTT GGAGATGGAA ACCTTTTACG CCCAAGCGAA GGACGCTGAC ATCATCATTT ACAATGCGAC CATTGACTCG GGGGTGAACT CCATCGATGA ACTGGTCATG AAGAACGAAC TGTTGGGTAA CTTTGCGGCT GTTCAGAACG GCAACGTGTG GGTGACCAGC CAGGACATGT ACCAGCAGAT GATGGCCACG GGAGATGTTA TCTCGGATTT CAATGCGGTG TTCACCGGGT CGGATGATGA CCTGACGTAT TTACAGAAGC TGGAATAA
|
Protein sequence | MTKTMHATLC CLMLAGLLCF LPACSAEPTE PASTAGASNT ASVATDASAD AADEPTFHNA DLGNDWKVVD SLDLQYATGF TVDYYEGGYK LACLSDGGRY LTVPEGASAP EGIDADIVVL QQPIDHVYLV ASDTMCLFDA LDEMDAIAVS GIAKENWHIP AAIEAMENGS IVYGGKYSAP DYDTLLAQGC ELSIQSTMIN HTPDVREKLI ELGIPVLTEQ SSYESEPLGR TEWIKLYGAL FDKEDVAAKL FDAQVEKAQS AIGTETGKTV AFFYINSNGA AVVRKPGDYV TKMISLAGGD YVFSDLGDDS ATSTVTLEME TFYAQAKDAD IIIYNATIDS GVNSIDELVM KNELLGNFAA VQNGNVWVTS QDMYQQMMAT GDVISDFNAV FTGSDDDLTY LQKLE
|
| |