Gene Shel_24460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24460 
Symbol 
ID8396334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2711048 
End bp2712265 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content55% 
IMG OID644987192 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003144803 
Protein GI257065131 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGA CGATGCATGC GACGCTATGC TGTCTGATGC TTGCAGGGTT GCTGTGCTTC 
CTGCCGGCTT GCTCTGCTGA ACCTACCGAA CCGGCATCGA CCGCGGGTGC ATCTAACACT
GCGAGTGTTG CGACGGATGC GTCCGCGGAT GCTGCCGACG AGCCGACATT CCACAACGCC
GATTTGGGGA ATGACTGGAA AGTCGTGGAC AGCCTGGACC TTCAGTACGC CACGGGATTT
ACCGTTGATT ATTACGAGGG AGGGTATAAG CTGGCCTGTC TTTCTGACGG CGGGCGCTAT
CTGACGGTGC CCGAAGGCGC GTCTGCGCCC GAAGGCATCG ACGCAGATAT AGTTGTGCTT
CAGCAGCCGA TCGACCACGT GTATTTGGTT GCTTCTGACA CCATGTGCCT TTTTGACGCG
TTGGATGAAA TGGACGCTAT TGCGGTTTCG GGCATAGCGA AGGAAAACTG GCATATCCCG
GCCGCAATAG AGGCTATGGA GAATGGGTCC ATCGTTTACG GCGGGAAATA CTCGGCACCC
GATTACGACA CCTTGTTGGC GCAAGGATGC GAGCTATCCA TCCAGTCGAC CATGATCAAC
CATACCCCGG ACGTGCGCGA GAAGCTTATC GAACTGGGAA TCCCTGTACT GACCGAACAG
TCGAGCTACG AAAGCGAACC ATTGGGCCGC ACTGAATGGA TCAAGCTGTA CGGCGCCTTG
TTCGACAAAG AGGATGTCGC GGCAAAGCTT TTCGACGCGC AGGTCGAAAA GGCCCAATCG
GCAATCGGAA CCGAAACGGG AAAGACCGTA GCTTTCTTCT ATATCAACAG CAATGGTGCG
GCGGTAGTGC GCAAGCCGGG CGACTATGTA ACGAAGATGA TTTCACTGGC GGGCGGCGAC
TATGTATTCA GCGATTTGGG CGACGATTCT GCGACGTCCA CGGTCACTTT GGAGATGGAA
ACCTTTTACG CCCAAGCGAA GGACGCTGAC ATCATCATTT ACAATGCGAC CATTGACTCG
GGGGTGAACT CCATCGATGA ACTGGTCATG AAGAACGAAC TGTTGGGTAA CTTTGCGGCT
GTTCAGAACG GCAACGTGTG GGTGACCAGC CAGGACATGT ACCAGCAGAT GATGGCCACG
GGAGATGTTA TCTCGGATTT CAATGCGGTG TTCACCGGGT CGGATGATGA CCTGACGTAT
TTACAGAAGC TGGAATAA
 
Protein sequence
MTKTMHATLC CLMLAGLLCF LPACSAEPTE PASTAGASNT ASVATDASAD AADEPTFHNA 
DLGNDWKVVD SLDLQYATGF TVDYYEGGYK LACLSDGGRY LTVPEGASAP EGIDADIVVL
QQPIDHVYLV ASDTMCLFDA LDEMDAIAVS GIAKENWHIP AAIEAMENGS IVYGGKYSAP
DYDTLLAQGC ELSIQSTMIN HTPDVREKLI ELGIPVLTEQ SSYESEPLGR TEWIKLYGAL
FDKEDVAAKL FDAQVEKAQS AIGTETGKTV AFFYINSNGA AVVRKPGDYV TKMISLAGGD
YVFSDLGDDS ATSTVTLEME TFYAQAKDAD IIIYNATIDS GVNSIDELVM KNELLGNFAA
VQNGNVWVTS QDMYQQMMAT GDVISDFNAV FTGSDDDLTY LQKLE