| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24350 |
|---|
| Symbol | |
|---|
| ID | 8396323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2698907 |
|---|
| End bp | 2700037 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644987181 |
|---|
| Product | glycerate kinase |
|---|
| Protein accession | YP_003144792 |
|---|
| Protein GI | 257065120 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1929] Glycerate kinase |
|---|
| TIGRFAM ID | [TIGR00045] glycerate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCTCG TTTTCGCATC CGATTCATTC AAAGGCAGCC TTTCCAGCGC CCGAACGGCC
GAGCTTCTGA CGCAGGCTGC GGGATTTGTG TTCGGCGATT GCGAATGCGT AAGCGCGCCC
ATGGCGGACG GTGGCGAAGG GACCGTCGAT GCCGTGCTTG CGGCATTAGG CGGAAAGCGC
ATCACCGTTA CCGTATTCGA CCCCCTCATG CGCTCGACCT GCGCCTCGTA CGGAATCTTG
CCCGATGGCC ATGCTGTGAT CGAGATGGCG GCCGCATCAG GGCTCACCTT GGTGGAGCCG
GACTTGCGCA ATCCGCTGAT GACCAGCACG TTCGGAACTG GACAGCTCAT TTTGGCCGCC
CTTGACCAAG GATGTCGGAA CATCACCGTG GGGCTGGGCG GTTCGGCCAC CAACGACGGC
GGCATGGGAT GCATCCGTGC GCTGGGCGGC CGGTTCGTGG ATGCAAGGGG ACATGAGCTT
CGCGGCTGCG GGCGCGACCT CGGCGAGGTT TCCGAAATAG ACATGCGCGG CTTGGATCCC
CGCCTGGGCG AAACGAGCAT CGCCATCATG TCGGATGTCA CCAACCCCCT ATGCGGACCC
GAAGGCGCAA CCTATATATA CGGCAGGCAA AAAGGCGCCA CCTCCGAAAT GTTGGAGCAG
TTGGAGCGGG GCATGCAGTC CTATTCAGAG GTTGTTCGGG AACAGTTTCA TATCGATTGC
AACAACACGC CTGGCGCCGG TGCCGCCGGA GGCCTGGGGG CGGCGTTGAT GGTCTTTCTG
GGAGGACGCC TGCAATCGGG CATCGAGTGT CTGCTCGACC TGATTGGGTT CGATTCGATG
CTCGAAGGCG CCGACCTGGT GGTCACGGGC GAAGGCAAGG CCGACGCGCA GAGCAGCCAT
GGCAAAACCA TGCAGGGCGT GGCACGACGC GCAACGACGA AGGGCATTCC CGTGTATGCC
TTGGTGGGTT CGATTGGCGA AGGTGCCGAG GCGCTTCTCG ATGACGGCAT CCTGTCGTTT
TTCGCGCTCC AGGAAGATGA CATGCCTCTG GATTACGCCA TGGCCCATGC GGAGGAGCTG
TATGCCGATA CCGCCGTGCG CCTGTTCCGC TCGTTTCGCG ATGCACGATA G
|
|---|
| Protein sequence | MKLVFASDSF KGSLSSARTA ELLTQAAGFV FGDCECVSAP MADGGEGTVD AVLAALGGKR
ITVTVFDPLM RSTCASYGIL PDGHAVIEMA AASGLTLVEP DLRNPLMTST FGTGQLILAA
LDQGCRNITV GLGGSATNDG GMGCIRALGG RFVDARGHEL RGCGRDLGEV SEIDMRGLDP
RLGETSIAIM SDVTNPLCGP EGATYIYGRQ KGATSEMLEQ LERGMQSYSE VVREQFHIDC
NNTPGAGAAG GLGAALMVFL GGRLQSGIEC LLDLIGFDSM LEGADLVVTG EGKADAQSSH
GKTMQGVARR ATTKGIPVYA LVGSIGEGAE ALLDDGILSF FALQEDDMPL DYAMAHAEEL
YADTAVRLFR SFRDAR
|
|---|
| |