| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24190 |
|---|
| Symbol | |
|---|
| ID | 8396307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2677284 |
|---|
| End bp | 2678690 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644987165 |
|---|
| Product | SNF family Na+-dependent transporter |
|---|
| Protein accession | YP_003144776 |
|---|
| Protein GI | 257065104 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCACAAG AGGCACGGGA GCACTTCGGC TCGCGAATCG GGTTCATTTT CGTAGCGGCA
GGCTGCGCCA TCGGATTGGG CAACGTCTGG CGGTTCCCCT ATATCGTAGG AGAATACGGC
GGAGCGGCGT TTATCGCCCT CTACCTGGTA TTCCTTGTCA TATTAGGCCT TCCCGTCATG
GTGATGGAGT TCGCTGTGGG TCGCGCCAGT CAGCAATCCA CTGCACGCGC CTTCGATGTG
CTGCCGTCCA AGAAGAACTT CCGCTGGTTC GGCTGGTGGG GCTACGTCGG CTCCATGCTG
CTGCTCATGT TCTACACCTC CATCTGCGGA TGGATGCTTT CCTACATCCC TAAGATGGCT
TCGAACATGT TCGACGGAGC CGATGCGGCA CTTACCGAAA CCGCCTTCAA CGCGATGGTG
GCGAACCCTT CAGAAATCAT GGCCTGGATG CTCGTATCAG TGGCCATCGG CGTCATCGTT
TGTGCGCTCG GCATCGAGAA AGGCGTCGAG CGGGTCTCCA AATTCATGAT GTCGTCCCTG
CTCATCCTTA TGGTCGTGCT CTGCATCCGT GCCATCACCC TGCCGAACGC CGCCGACGGG
CTCAAATTCT ACCTACTGCC TGATTTCGGC CACCTGTTCG CTGGAGACAC ATTGCCCCAG
AAGATGGGAT CGCTCGGCAA TGCGGTGTAC GCCGCCATGG GCCAGGCGTT CTTCTCGCTT
TCGGTCGGCA TGGGCGGCCA GGCGATTTTC GGCTCCCGCA TCGGCCGCGA GCGCAGCCTG
ACTGGCGAGG CGCTTTCCAC CGTAGGCATG GACACCGCCG TGGCCATCAT GGCGGGACTC
ATCATCTTCC CCGCGTGCTT CGCTTACGGC ATCAACCCCG ATTCCGGCCC GTCCCTCGTT
TTCCAGACCC TGCCTGTGGT GTTCGGCCAG ATGCCGCTTG GCAACGTATG GGGCTGCCTG
TTCTTCGTGT TCATGGGCTT CGCGGCCCTT TCCACCGTCA TTGGCGTGTT CGAGCTGCTG
GTCACCTGGA CCATGGACCG CTGGGGATGG ACCCGTCGGC AGGCCGTCAT CCGCAACGGC
ACCATGCTCG CCGTGCTCAG CATCCCCTGC GTGCTGGGAT TCAACGTGTG GAGCGGGCTC
GAAATTCCCG GCATCGGCAA CATCCAGGGC ATCGAGGACT TCATCGTGTC CAGCAACATC
CTGCCGCTGG GCGGCCTCGT CTTCACGGTG TTCTGCTGCA GCTCATGGGG CTGGGGCTGG
GACAATTTCA TTGCCGAGGT CGACGCCGGA GAGGGCATCC GCTTCCCCAA GTTCCTCAAG
GGCTGGTGCA CATACGGCAT CCCCGTGCTG GGCATCATCA TCTTCGTCAT GGGGTACGCG
CCGCTGGTTC ATACTTGGAT CGGCTAG
|
|---|
| Protein sequence | MAQEAREHFG SRIGFIFVAA GCAIGLGNVW RFPYIVGEYG GAAFIALYLV FLVILGLPVM
VMEFAVGRAS QQSTARAFDV LPSKKNFRWF GWWGYVGSML LLMFYTSICG WMLSYIPKMA
SNMFDGADAA LTETAFNAMV ANPSEIMAWM LVSVAIGVIV CALGIEKGVE RVSKFMMSSL
LILMVVLCIR AITLPNAADG LKFYLLPDFG HLFAGDTLPQ KMGSLGNAVY AAMGQAFFSL
SVGMGGQAIF GSRIGRERSL TGEALSTVGM DTAVAIMAGL IIFPACFAYG INPDSGPSLV
FQTLPVVFGQ MPLGNVWGCL FFVFMGFAAL STVIGVFELL VTWTMDRWGW TRRQAVIRNG
TMLAVLSIPC VLGFNVWSGL EIPGIGNIQG IEDFIVSSNI LPLGGLVFTV FCCSSWGWGW
DNFIAEVDAG EGIRFPKFLK GWCTYGIPVL GIIIFVMGYA PLVHTWIG
|
|---|
| |