Gene Shel_24120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24120 
Symbol 
ID8396300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2670304 
End bp2670873 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content60% 
IMG OID644987158 
Product5,10-methenyltetrahydrofolate synthetase 
Protein accessionYP_003144769 
Protein GI257065097 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACA TTGCTTCGAA AAAGAACGAA CTGCGCCGAA AGCTCAGGGC ACTGAGAAAC 
GACCTGGGCG AAGACAACCG CGTCGCCATC GATGCGGTTG TGGCGACGAA CGTGTGTGAA
CACCCCGCCT ATCAGCAGGC TGATGCCGTG TACGCCTACC TGTCGGTAGG TGCGGAAGTG
GATACCCGTG CCATCATTCG GGATGCCTGG TCGAAGGATA AAATGGTGGC GGTGCCCCGA
TGCGTGCCGA ATACTTCGCT CATGGATTGG TATCGTATCG ACGACTTCGA AGGGCTTGAG
GCCAGCTCCT TCGGAATCGA GGAACCGCCG GCAAACCCGG ATCGGTTGGT GGCCTTGCCT
GCGGAAGGCA TCCAGGCCGT TGCGCTGGTG CCCGCGTTCT CCTTCGACCC TGACCGGTTC
CGACTAGGCT ATGGCGGCGG GTTCTACGAC GAGTTCCTGC CGAACTTCCA TGGCGTGTCG
ATCGGTTTGT GCCGTGCCTG TCAGATGAGC GACGTTCCGC TGCCTCGTCG CGAGGGGGAT
ATCGCCGTCG ACGTGGTGAT AACCGATTAG
 
Protein sequence
MDDIASKKNE LRRKLRALRN DLGEDNRVAI DAVVATNVCE HPAYQQADAV YAYLSVGAEV 
DTRAIIRDAW SKDKMVAVPR CVPNTSLMDW YRIDDFEGLE ASSFGIEEPP ANPDRLVALP
AEGIQAVALV PAFSFDPDRF RLGYGGGFYD EFLPNFHGVS IGLCRACQMS DVPLPRREGD
IAVDVVITD