Gene Shel_24070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24070 
Symbol 
ID8396295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2665008 
End bp2665925 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID644987153 
ProductABC-type cobalt transport system, ATPase component 
Protein accessionYP_003144764 
Protein GI257065092 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.850026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGT TCGACAATGT CGGCTTCACT TATCAGCACG CCGCCGACAT CAAGCGCGCA 
AAGCGCCGCA AGCGCGTTGC TGCCGAACCC CGCGCCGATT GGGGCAACCG TCCCGATGAG
GTATGGGCGC TGCGCAACAT CAGCTTCACG TTGGACAAGG GCGAGTTCCT GGGCATCGCC
GGGCATACCG GCAGCGGCAA GAGTACCCTC ATCCAACACA TAAACGGCCT GCTCACACCT
ACCGAAGGAC GAGTGCTCAT CGATGGGGAG CCCGTCGGCA ACCCCGAAAC CGCCGCCAAA
TCCGGCATCG GCATGGTGTT CCAATACCCC GAACACCAGC TGTTCGCAGC CAGCGTGTAT
GAAGACGTGG TGTTCGGGCC GCGCAACCTG GGCTGCAGCG CCGACGAGGC CGAAGAGCGC
TACCGCAAGG CCATGGACCG CGTCGACCTA GATGCCGACG CCCTGCGGGA CGCGAGCCCC
TTCGGGCTGT CCGGCGGACA GCAGCGCCGC GTCGCCTTCG CCGGCGTTTT GGCCATGGAG
CCCACCGTGC TGGTGCTCGA CGAGCCGGTG GCGGGCCTCG ACCCCAAATC CCGAGAGGAC
TTTCTGCAGT TCATAGCCAG GCTTCATCGT GAACAGGGGC TCACCGTGGT CATGGTGTCC
CACGCCATGG ACGACCTGGC GCGACTGTGC ACCCGGGTGC TGATGCTCAA CCAAGGGCGG
ATGCATGCCT TGGGCACGCC CGCCGAAGTG TTTGCCGACG GCGACCAGAT GAAGGCCATC
GGCCTGGGCC AGCCCGCCGC GCAACGGGTG GGGTCCAAGC TCATGGCGAA AGGCATCGAC
CTGCAGCAGC CCGACGGGCT GTTTACCCTG GAGACGCTGA CCAGCGCCGT GGCTCAGGTT
TGGAAGCAGC GTGCCTGA
 
Protein sequence
MIEFDNVGFT YQHAADIKRA KRRKRVAAEP RADWGNRPDE VWALRNISFT LDKGEFLGIA 
GHTGSGKSTL IQHINGLLTP TEGRVLIDGE PVGNPETAAK SGIGMVFQYP EHQLFAASVY
EDVVFGPRNL GCSADEAEER YRKAMDRVDL DADALRDASP FGLSGGQQRR VAFAGVLAME
PTVLVLDEPV AGLDPKSRED FLQFIARLHR EQGLTVVMVS HAMDDLARLC TRVLMLNQGR
MHALGTPAEV FADGDQMKAI GLGQPAAQRV GSKLMAKGID LQQPDGLFTL ETLTSAVAQV
WKQRA