Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23940 |
Symbol | |
ID | 8396283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2653638 |
End bp | 2654303 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644987141 |
Product | hypothetical protein |
Protein accession | YP_003144752 |
Protein GI | 257065080 |
COG category | [S] Function unknown |
COG ID | [COG2357] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00231271 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAACCG AAATTCGCGA TTCCATTTAC GGCGATAATC TCGAAGTCAT GGAAGCCTTG CGTCAGGAAA TAGTAACTTC AATAAAAACC CTAGGTCAGA GCTTGGAGAT GGAATCGGGC CTCAGTCCGG TCGACCATTG CGTGTCGCGC ATCAAGTCCG AAGAGTCCAT GCGCGAGAAA TGCCGCCGCC GTGGCCTTCC GGAAACCGCC GCATCGGCGC TTTTGACTAT TCACGACGCC ATCGGCGTGC GGGTGGTCTG TGCATTTCCG AGCGACGTGT ATCTGGTGAG GGATCATTTG CGGGACCTAC CCGGATTCGA GATCTTCGAG GAGAAGGACT ACATCCGCGA GGCAAAGTCC AACGGCTACC GCAGCCTGCA CCTTATCCTT CGAACGAACG ACGGACGAGC GCCTGCCGGC TGTGCCTTGC TGACTCCGGG AACGCCCCGC GCAGGCGGCT TCTTCGTCGA GGTCCAGCTG CGGACCATCT CGATGGAGTC TTGGGCGGCC CTCGAACACC AGATGAAATA CAAGAAGGAG CCCTCCGCCA AAGAGAGGCT CATCGTGGCC GAGCTCAAAC GCTGTGCTGA CGAGCTGGCC TCGACCGACC TGTCCATGCA GGCGATTCGG GACCTGATTT TGGAAGACCG CAACGCCGCG CGGTAA
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Protein sequence | MQTEIRDSIY GDNLEVMEAL RQEIVTSIKT LGQSLEMESG LSPVDHCVSR IKSEESMREK CRRRGLPETA ASALLTIHDA IGVRVVCAFP SDVYLVRDHL RDLPGFEIFE EKDYIREAKS NGYRSLHLIL RTNDGRAPAG CALLTPGTPR AGGFFVEVQL RTISMESWAA LEHQMKYKKE PSAKERLIVA ELKRCADELA STDLSMQAIR DLILEDRNAA R
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