Gene Shel_23940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23940 
Symbol 
ID8396283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2653638 
End bp2654303 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content59% 
IMG OID644987141 
Producthypothetical protein 
Protein accessionYP_003144752 
Protein GI257065080 
COG category[S] Function unknown 
COG ID[COG2357] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00231271 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAACCG AAATTCGCGA TTCCATTTAC GGCGATAATC TCGAAGTCAT GGAAGCCTTG 
CGTCAGGAAA TAGTAACTTC AATAAAAACC CTAGGTCAGA GCTTGGAGAT GGAATCGGGC
CTCAGTCCGG TCGACCATTG CGTGTCGCGC ATCAAGTCCG AAGAGTCCAT GCGCGAGAAA
TGCCGCCGCC GTGGCCTTCC GGAAACCGCC GCATCGGCGC TTTTGACTAT TCACGACGCC
ATCGGCGTGC GGGTGGTCTG TGCATTTCCG AGCGACGTGT ATCTGGTGAG GGATCATTTG
CGGGACCTAC CCGGATTCGA GATCTTCGAG GAGAAGGACT ACATCCGCGA GGCAAAGTCC
AACGGCTACC GCAGCCTGCA CCTTATCCTT CGAACGAACG ACGGACGAGC GCCTGCCGGC
TGTGCCTTGC TGACTCCGGG AACGCCCCGC GCAGGCGGCT TCTTCGTCGA GGTCCAGCTG
CGGACCATCT CGATGGAGTC TTGGGCGGCC CTCGAACACC AGATGAAATA CAAGAAGGAG
CCCTCCGCCA AAGAGAGGCT CATCGTGGCC GAGCTCAAAC GCTGTGCTGA CGAGCTGGCC
TCGACCGACC TGTCCATGCA GGCGATTCGG GACCTGATTT TGGAAGACCG CAACGCCGCG
CGGTAA
 
Protein sequence
MQTEIRDSIY GDNLEVMEAL RQEIVTSIKT LGQSLEMESG LSPVDHCVSR IKSEESMREK 
CRRRGLPETA ASALLTIHDA IGVRVVCAFP SDVYLVRDHL RDLPGFEIFE EKDYIREAKS
NGYRSLHLIL RTNDGRAPAG CALLTPGTPR AGGFFVEVQL RTISMESWAA LEHQMKYKKE
PSAKERLIVA ELKRCADELA STDLSMQAIR DLILEDRNAA R