Gene Shel_23850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23850 
Symbol 
ID8396274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2644690 
End bp2646072 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content61% 
IMG OID644987132 
Producthypothetical protein 
Protein accessionYP_003144743 
Protein GI257065071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0149528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAT TCGAAACCCA ACGTGAGCGA CTCACGAAAC TTATCGCAAC GACCTGCGTG 
ACTGGCGTGC TTGTATTCTC CCTGACGGCG TGCGGGTCGA CGGATGCGAC TGCGGAAAAC
GTGCAGGTCG AAGCGTCCGA GGCCACCGAG GCGCGGCTGC AGGACACTTC CGCCGACAAC
GCCACGCCTA GCGGGCCTGC GACAGAGGGT GAGGCCCAAG CTGCCGCCTC TTCTGCGACG
GAATCGAACG GTGAAGGCGC GCTGGACACA TCCGACATGT TCTCGGATCG CGACCTGGAA
CAGGAGGCGG ACACCTCGAA CGCCACGGAA ATCACGCTGA CCAGCAACGA GGACGTCGCC
ATTACCGAAG AAGGCGTCTA CGTCATCACG GGGTCGGCCG AGAACTGCAC TATCGTCGTC
GCGGCGGACG ATGCCGCAAA GGTTCAGCTC GTGCTTGACG GCGTGACCAT CGTCAACGAC
GACGCGGCAG CCATCTACGT GGCGTCTTGC GACAAGGTGT TCGTAACAAC CACGGACACC
GAGAACACCT TGGAGGTGAC AGGCACCTTC TCCACCGAAA ACGAAACCGC AGGCGATGCG
GCGGTCTTCT CCAAATCCGA TCTGGTGCTG AACGGCGTCG GCACGCTGAA CGTCACCTCG
ACTGACAACG GCATTTCCGG GCATGACGAC CTGAAGATTA CCGGCGGCAC ATACAATATA
ACGAGTGAAG CCGATGCTGT GGAAGGCCAC GACTCCATCC GCATTTGCGA CGGCATCTTC
ACCATCCACT CTGGCAAGGA CGGTTTCCAC AGTGAGGATT CCGACGACGA CACGGTGGGC
TACGTCTATA TCAGCGGCGG CACCTTCGAC ATTACGGCCG CCGATGACGG CATCCAGGCA
ACCACGATCG GCCAGATTGA TGGCGGCACG TTCACTATCA GCGCTGTCGA AGGTATCGAG
GGGACGTATG TCCAGATCAA CGGTGGCACT ATCGACATCG AGGCCAGCGA CGACGGCATC
AACGCCACCG GCAAGTCGAC GGCTTACGAC ATCGTGCTCG AGATCAACGG CGGCGAGACC
GCCATCGTCA TGGCGCAGGG CGACACCGAT GCGCTGGATT CCAACGGAAA TCTCGTCATC
ACAGGTGGCA CGGTCGACAT CACGGCGAAT TCGCCTTTCG ACTATGACTA TCAGGGCGTT
TTGGAAGGTG GCACCGTGAT TGTGAACGGC GAGCAGGTTA CGGAACTGAC CAGCGCCATG
ATGGGTGGCG ACATGGGCGG GCAGATGCCG GGCGGCGACA TGGGCGGCGC GCCTGGCGAC
ATGGGCGGGC AGATGCCTGG CGGCGACATG GGCGGGCGGA TGCCTGGCGA GCTTTCCGCA
TAG
 
Protein sequence
MIKFETQRER LTKLIATTCV TGVLVFSLTA CGSTDATAEN VQVEASEATE ARLQDTSADN 
ATPSGPATEG EAQAAASSAT ESNGEGALDT SDMFSDRDLE QEADTSNATE ITLTSNEDVA
ITEEGVYVIT GSAENCTIVV AADDAAKVQL VLDGVTIVND DAAAIYVASC DKVFVTTTDT
ENTLEVTGTF STENETAGDA AVFSKSDLVL NGVGTLNVTS TDNGISGHDD LKITGGTYNI
TSEADAVEGH DSIRICDGIF TIHSGKDGFH SEDSDDDTVG YVYISGGTFD ITAADDGIQA
TTIGQIDGGT FTISAVEGIE GTYVQINGGT IDIEASDDGI NATGKSTAYD IVLEINGGET
AIVMAQGDTD ALDSNGNLVI TGGTVDITAN SPFDYDYQGV LEGGTVIVNG EQVTELTSAM
MGGDMGGQMP GGDMGGAPGD MGGQMPGGDM GGRMPGELSA