Gene Shel_23710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23710 
Symbol 
ID8396260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2627349 
End bp2628125 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID644987118 
Productmolybdopterin/thiamine biosynthesis dinucleotide-utilizing protein 
Protein accessionYP_003144729 
Protein GI257065057 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.94678e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.987322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA ACCGCTTTTC CCGCACCGAG CTCATCATGG GCGCCCCCGC CCTGGAACGC 
CTGTCCGCAA GCCGCGTCGC CGTGTTCGGC GTGGGCGGCG TGGGCGGTTA CGTGGTAGAG
GCCCTGGTTC GTGGCGGCGT GGGCGCGTTG GACCTGATCG ACAACGACAC CGTGTGCCTG
ACTAACATCA ACCGCCAGAT CATAGCCACC GACGAAACGC TGGGGCGCCT TAAGGTGGAC
GTGGCCGCCG AGCGCATCCG CACCATCAAC CCCGATTGCC GCGTGACCAC CCACACCTGC
TTCTATCTTC CCGAAACCGC GGACCGCTTC GATTTCACGC AGTACGACTA CGTGGTGGAC
GCCGTGGACA CGATTACCGC GAAGCTCCAG CTCATCACCG AGGCCTTCAA CACGCAGACA
CCTATCATCT CCAGCATGGG CACCGCCAAC AAAATGGACC CTACTGCGTT TCAGGTGGCC
GATATCTCCA AAACCAGCGT GTGCCCCCTG GCGAAGATCA TCCGCAAGGA GCTGCGCAAA
CGCGGCATCA AACACACCAA GGTGGTCTAT TCCACCGAGC AGGCCCTCAC GCCGCTGCCC
CTTCCCGAAG ATACCGACCT GCCGCTGGAC CCCTCCGACA TCGACAGCCG TACGGGCCGC
CGCAAAATCA CCCCGGGTTC GAACTCCTTC GTGCCTCCCG TCGCCGGGTT CATCATCGCC
TCCGAGGTCA TCAAAGACCT GACGGACGGT TTGCGCCTCG ACCAGGCCGG CGTGTAA
 
Protein sequence
MALNRFSRTE LIMGAPALER LSASRVAVFG VGGVGGYVVE ALVRGGVGAL DLIDNDTVCL 
TNINRQIIAT DETLGRLKVD VAAERIRTIN PDCRVTTHTC FYLPETADRF DFTQYDYVVD
AVDTITAKLQ LITEAFNTQT PIISSMGTAN KMDPTAFQVA DISKTSVCPL AKIIRKELRK
RGIKHTKVVY STEQALTPLP LPEDTDLPLD PSDIDSRTGR RKITPGSNSF VPPVAGFIIA
SEVIKDLTDG LRLDQAGV