| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23710 |
|---|
| Symbol | |
|---|
| ID | 8396260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2627349 |
|---|
| End bp | 2628125 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644987118 |
|---|
| Product | molybdopterin/thiamine biosynthesis dinucleotide-utilizing protein |
|---|
| Protein accession | YP_003144729 |
|---|
| Protein GI | 257065057 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000394678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.987322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTCA ACCGCTTTTC CCGCACCGAG CTCATCATGG GCGCCCCCGC CCTGGAACGC
CTGTCCGCAA GCCGCGTCGC CGTGTTCGGC GTGGGCGGCG TGGGCGGTTA CGTGGTAGAG
GCCCTGGTTC GTGGCGGCGT GGGCGCGTTG GACCTGATCG ACAACGACAC CGTGTGCCTG
ACTAACATCA ACCGCCAGAT CATAGCCACC GACGAAACGC TGGGGCGCCT TAAGGTGGAC
GTGGCCGCCG AGCGCATCCG CACCATCAAC CCCGATTGCC GCGTGACCAC CCACACCTGC
TTCTATCTTC CCGAAACCGC GGACCGCTTC GATTTCACGC AGTACGACTA CGTGGTGGAC
GCCGTGGACA CGATTACCGC GAAGCTCCAG CTCATCACCG AGGCCTTCAA CACGCAGACA
CCTATCATCT CCAGCATGGG CACCGCCAAC AAAATGGACC CTACTGCGTT TCAGGTGGCC
GATATCTCCA AAACCAGCGT GTGCCCCCTG GCGAAGATCA TCCGCAAGGA GCTGCGCAAA
CGCGGCATCA AACACACCAA GGTGGTCTAT TCCACCGAGC AGGCCCTCAC GCCGCTGCCC
CTTCCCGAAG ATACCGACCT GCCGCTGGAC CCCTCCGACA TCGACAGCCG TACGGGCCGC
CGCAAAATCA CCCCGGGTTC GAACTCCTTC GTGCCTCCCG TCGCCGGGTT CATCATCGCC
TCCGAGGTCA TCAAAGACCT GACGGACGGT TTGCGCCTCG ACCAGGCCGG CGTGTAA
|
|---|
| Protein sequence | MALNRFSRTE LIMGAPALER LSASRVAVFG VGGVGGYVVE ALVRGGVGAL DLIDNDTVCL
TNINRQIIAT DETLGRLKVD VAAERIRTIN PDCRVTTHTC FYLPETADRF DFTQYDYVVD
AVDTITAKLQ LITEAFNTQT PIISSMGTAN KMDPTAFQVA DISKTSVCPL AKIIRKELRK
RGIKHTKVVY STEQALTPLP LPEDTDLPLD PSDIDSRTGR RKITPGSNSF VPPVAGFIIA
SEVIKDLTDG LRLDQAGV
|
|---|
| |