| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23660 |
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| Symbol | |
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| ID | 8396255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2620434 |
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| End bp | 2621819 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644987113 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003144724 |
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| Protein GI | 257065052 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.629317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.503051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGATGG AAAGGGGCGA CATCGTGACG GCAGTGTTTC GCGAAGGCCG CGCATGGGTG
TATGCGATGT TTGCCGCCAT CGTGTTGTCC GCATCGTTGG GCGGACTGTC CCAAACGGGC
CTGAACGCTA TGCTGTCCCA GGTCTGTTCC GAGTTCGGGA TATCGACCGG AGTGGGGCAG
TGGCTCGCCA CCATCTATAT GTTCGTCATC GGCGCCATCG TGCCGCTCTC GTCGTTTTTC
ATGGGGCGTT TCCGCACCAA AGACCTGGTG CTGCTTTCGG CGGGGCTGTT CATCGGCGGC
GCGTTGCTGG CTGCGTGCGC GCCCAACTTC TGGATGCTGC TGTTCGCCCG CATCATGCAG
GCCTGCGCCA CAGGTCTGCT CATGCCGCTC ACCCAGACCT TCTCCATGAC CCGGTTTCCA
GAGGGGCGCA AGGCCACGGC TATGGGCATC TCCGGCATCG CCATGGGTTT CGCGCCGAAC
ATCGGGCCCA CCATCGGCGG TTCCATGGTC GACGCTTTCG GTTGGCGAAG CTTCTTCTGG
ATGTTGGCGG GCATCGCACT GGCTATCGCT TTGGCCTGCG CTTTCTTGGT ACAACGCCAC
GACGACGCCT CGTATCCGGC GGGCATCGAC CCGATTTCCT TCGTGCTGTG CACCACAGGG
TTCGGCGGCA TACTCATGGC ATGCTCCTAC GCCTCCTCAT ACGCGGTGCT CGATCCGCAC
GTCTGGGGGC CGGCGGTCGT CGGTGTTGCG ACCCTGGTGG CGTTCTTCCT TCGTCAAACC
CGCATCGAGC GGCCTATGGT GGATCCGAGC ATCTTCAAGA GCCGCTCGTT CAACGCAGGA
TTCGCGGCGT TGTGCCTGCT TACGGCATCG TTCATGGGCA TCACGCTGCT GGTACCGCTC
TATATTCAGG GGCTGTGCGG CGGCACCGCC TTCGAGGCGG GCATCGTGCT TCTACCCGGC
ACGGTGACGG CGCTTGTCAT GAATCCGCTG GCAGGCTATC TGACAGACAA GATCGGAGTG
CGTCCTGTGA CCGTGGTGGC CGGATTGTTC TTGGCGACGG GCTCTGCCAT GATGGCTTTC
TGCGACGCGT CCACTTCGCT CGGCGTCGTC GCCTGCATCC AGGCCATCCG GCAGATCGGT
GTTTCCAGCC TTATCGGCCC GCTGACGTCG TTCAGCCTGT CGCAGCTCAA GGGTAAATGC
ATCTCCGACG GCAGCGGATT CGGCTTGGCC GCGCGCCAGA CCAGCGCCTC GGTGGGTACG
GCGCTCATGG TGTTCTGCCT CGAAGGGGCC GGGCTTGCCG GCGAGATGTC CTTCCACGCG
GCGTTCGGTG TGAGTGCGGT CTGCGCCATC GGGTGCCTGC TCGTCATCCT GCGCCGGGTC
CGATAA
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| Protein sequence | MKMERGDIVT AVFREGRAWV YAMFAAIVLS ASLGGLSQTG LNAMLSQVCS EFGISTGVGQ
WLATIYMFVI GAIVPLSSFF MGRFRTKDLV LLSAGLFIGG ALLAACAPNF WMLLFARIMQ
ACATGLLMPL TQTFSMTRFP EGRKATAMGI SGIAMGFAPN IGPTIGGSMV DAFGWRSFFW
MLAGIALAIA LACAFLVQRH DDASYPAGID PISFVLCTTG FGGILMACSY ASSYAVLDPH
VWGPAVVGVA TLVAFFLRQT RIERPMVDPS IFKSRSFNAG FAALCLLTAS FMGITLLVPL
YIQGLCGGTA FEAGIVLLPG TVTALVMNPL AGYLTDKIGV RPVTVVAGLF LATGSAMMAF
CDASTSLGVV ACIQAIRQIG VSSLIGPLTS FSLSQLKGKC ISDGSGFGLA ARQTSASVGT
ALMVFCLEGA GLAGEMSFHA AFGVSAVCAI GCLLVILRRV R
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