| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23450 |
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| Symbol | |
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| ID | 8396234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2592082 |
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| End bp | 2594595 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644987092 |
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| Product | topoisomerase IA |
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| Protein accession | YP_003144703 |
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| Protein GI | 257065031 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000217154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000285044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGCTAG TCGTAACCGA GAAAAACAAC GCTGCCCAAA GAATCGCCGA ACTGCTCGGC
GTGAAGAAAC CGAAAAGCGA CAAGGTATAC AACACGCCCG TATACCGGTT CGAGCGCGAT
GGGGAAGAGT GGGTTTCCAT CGGTCTGCGC GGCCATATTC TCGAACCTGA TTTCGTGCCG
ACCATCACCT ACAAGCGCAA CAAGGGTTGG CTGGCCACGC CCGATGACGG CGCAAGCTAC
AAGGTGGACA TCCCGTCGTT TCTGCCTAAG CCGCCGTTCA AGACCAAACG CAAGCCGTTT
TTGGCCGACG GTGTGGCCAT CGGCGGTTCC TGGAAGATGG ATGCGCTGCC GTACCTGGTG
TACGCGCCCA TTCAGAAGAA TCCCAAAGAG AAGGACATCA TCCGCAGCCT GAAGAACCTT
GCGAAAAAGG CCGATGACAT CATCATCGCG ACCGACTTCG ACCGCGAAGG CGAGCTCATC
GGCTCCGATG CGCTCAGCTG CATCCGTGAG GTCAACACCA CGGCCCCGGT GTCCCGCGCG
CGCTATTCCG CTTTGATCAA GCCCGAGATC ACCCATGCGT TCGAGAATCT GGTCGAGCTG
GACATGAACC TCGCGCATGC GGGCGAAAGC CGTCAGGAGA TCGACCTCAT CTGGGGTGCC
GTGCTTACGC GGTATCTCAC CATTGTGAAA TTCGCGGGCT ACGGCAACGT GCGTTCCTCG
GGCCGCGTGC AGACCCCCAC GTTGGCGCTC ATCGTGGAGC GCGAACGCGA ACGCATGGCG
TTCGTGCCGG AAGACTACTG GGTCATCAAG GCCAAGTTCT CCGATGGAAT CGAGCCTTTC
GAAGCCACCC ACAAGGAAGG TCGCTTCAAG ACGCAGGAAG CGGCCGACGC CGTCATGAAC
GCCGTCAACG GCGCCCAGTT CGGCACCGTG TCCGGCATCG AGAAGCGCAA GCGCACCGTT
TCGGCGCCCA CGCCCTTCAA CACCACGGGC CTTATGGCTG CGGCCGCCGC CGAGGGGCTG
TCGCCTGCCC GTACCATGCG CCTGGCTGAA AGCCTGTACA TGGCCGGTTA CACGTCGTAC
CCCCGTGTGG ACAACACGGT GTACCCGTCC TCCTTCGACC TTCCTGCCAT GGTGAAGACC
CTGTCCGAAG TGCCCGCGTA CGAGCCCTAT TGCCGCCAGC TGCTGGCCAA AGGCACGCTT
ACGCCCACAC GCGGCAAGCA GGAATCCACC GACCATCCGC CCATCGTCCC CATGCAGGCC
GCCAGCCCCG ATAAGCTGCA GCCTGCGGAG TGGAAGCTTT ACAACCTCAT CGCACGTCGG
TTCCTGGCCA CGCTTTCCGA CGCCGCCGTC ATCGAGGGCA CGAAGGTGTC TGTCGACGTC
AATGACGAGA CGTTCATCAC CCGCGGCGAC GTGGTCGTCA AGCCGGGCTT CAGGGCCATC
TATCCTTACG GCGCGAAAAA AGACACCATC CTGCCGCAGC TCAACGAAGG GCAGCAGGTC
GATTTCCTGG GCGCAACCTG CGAGCAAAAG CAGACCGAGC CCCCCGCGCG CTATTCCCAG
GGCAAGCTCA TCCAGGAGAT GGAGAAGTTG GGCTTGGGCA CCAAGGCCAC GCGCCATTCG
ATCATCGACC GGCTCTACAA TGTGAAGTAC ATCCAGAACG ACCCCATCGA GCCGAGCCAG
CTGGGCATTG CCGTGTGCGA CGCTTTGGGT CGTTTCGCGC CGCAGATCAC CAGCCCGGGC
ATGACGGCCG AGCTGGAAAA GGACATGAAC CAGATCGCCG ACGGAGATAA GACTCAGAAA
GAGGTCGTCG ATCTGTCCCG TGACATTCTC AACGACGTGC TTAAGGAGCT CATGCCTCAT
TCCGAAGAGG TCGCCAGCGC CCTGGGCGAC GCCGTGGCGG CCGATGCCTA TGTGGGTACC
TGCCCCAAAT GCGGCAAGGA CCTGCAGATG CGCGCCTCCA ATAAGACGAA ATCCATGTTC
ATCGGGTGCT CGGGCTGGCC TGAGTGCGAT GTCACCTACC CGCTGCCGAA AGGCAAAGTG
GAAGTGGTTG AGGAGAAATG CCCGGTGTGC GGCATGCCTC AGATCAAGGT GACGGCATTC
CGCTCTAAGC CGCGCGTCCA GTGCATCGAC CCCAACTGCG ACAGCAACCA GGAACCCGAT
GTGATTGTAG GCGCCTGCAA GGCCTGCGCC GAAAAGGGCT TGGACAAGAA ACTCATCGCG
CAGCGCAATC CGCGCACATT GAAGCGGTTC ATCCGATGCG AGAACTATGA GGAATGCGGC
GTAAGCTACC CGTTGCCGCA ACATGGCGAG CTCAAGGCCA CCGAGGAGGT TTGCCCCGAC
TGCGGCGCAC CCATGGTGAT TGTGACTACC GGTCGCGGAC CGTGGAAGCT GTGTCCCAAC
TTCGACTGCC CCGGCAAGGA GAAGGAGGAG GGCGCGGAGG ACAAGAAGGC CCCTGCGAAG
AGGACCACCC GAAAGACCGC GACGAAGAAA ACCACCCGCA AGACTTCCAA ATAG
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| Protein sequence | MKLVVTEKNN AAQRIAELLG VKKPKSDKVY NTPVYRFERD GEEWVSIGLR GHILEPDFVP
TITYKRNKGW LATPDDGASY KVDIPSFLPK PPFKTKRKPF LADGVAIGGS WKMDALPYLV
YAPIQKNPKE KDIIRSLKNL AKKADDIIIA TDFDREGELI GSDALSCIRE VNTTAPVSRA
RYSALIKPEI THAFENLVEL DMNLAHAGES RQEIDLIWGA VLTRYLTIVK FAGYGNVRSS
GRVQTPTLAL IVERERERMA FVPEDYWVIK AKFSDGIEPF EATHKEGRFK TQEAADAVMN
AVNGAQFGTV SGIEKRKRTV SAPTPFNTTG LMAAAAAEGL SPARTMRLAE SLYMAGYTSY
PRVDNTVYPS SFDLPAMVKT LSEVPAYEPY CRQLLAKGTL TPTRGKQEST DHPPIVPMQA
ASPDKLQPAE WKLYNLIARR FLATLSDAAV IEGTKVSVDV NDETFITRGD VVVKPGFRAI
YPYGAKKDTI LPQLNEGQQV DFLGATCEQK QTEPPARYSQ GKLIQEMEKL GLGTKATRHS
IIDRLYNVKY IQNDPIEPSQ LGIAVCDALG RFAPQITSPG MTAELEKDMN QIADGDKTQK
EVVDLSRDIL NDVLKELMPH SEEVASALGD AVAADAYVGT CPKCGKDLQM RASNKTKSMF
IGCSGWPECD VTYPLPKGKV EVVEEKCPVC GMPQIKVTAF RSKPRVQCID PNCDSNQEPD
VIVGACKACA EKGLDKKLIA QRNPRTLKRF IRCENYEECG VSYPLPQHGE LKATEEVCPD
CGAPMVIVTT GRGPWKLCPN FDCPGKEKEE GAEDKKAPAK RTTRKTATKK TTRKTSK
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