Gene Shel_23440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23440 
Symbol 
ID8396233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2590806 
End bp2591636 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content64% 
IMG OID644987091 
ProductLSU ribosomal protein L2P 
Protein accessionYP_003144702 
Protein GI257065030 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.61637e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.03379e-08 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGAGTCA AGCAGTACAA GCCGACTAGC CCCGGTCGCC GCTTCCAGAC GGTCTCGGAC 
TTCGCCGAGA TCACGACGGA CAAGCCGGAG AAGTCGCTGC TTGCGCCTCT GCCCAAGAAG
GCAGGACGCA ACAACAACGG TCGCATCACC ACCCGTCATC AGGGTGGCGG CAACAAGCGT
CGTTACCGCA TCATCGATTT CAAGCGCAAC AAGGACGGCG TGCCCGCCAA GGTCGCTACC
ATCGAGTACG ACCCGAACCG CTCCGCCCGC ATCGCTCTGC TCCACTATGT GGACGGCGAG
AAGCGCTACA TCCTTCATCC GAAGGGCCTG CAGGTCGGCG ACATGGTCGT CTCCGGCCCC
AATGCAGACA TCAAGCCCGG CAACGCCATG CCTCTGGCCG ACATCCCCGT CGGTACTCTG
ATTCATGCTG TCGAGCTGCA GCCCGGCCGC GGCGCCGCCC TGGCCCGTTC CGCCGGCACC
TCCATCCAGC TGATGGGCAA GGAAGGCAAC TACGCCATCC TCCGCATGCC CTCTTCTGAG
ATGCGCCGCG TTCTCCTTAC CTGCCGCGCC ACGATTGGTG AGGTTGGCAA CGCCGACCAT
GCCAACGTGA AGATCGGCAA GGCAGGCCGC AACCGCTGGA AGGGCATCCG TCCGACCGTC
CGCGGTACCG TCATGAACCC TGTCGACCAT CCCCATGGTG GCGGCGAGGG CAAGAACAAG
ACCGCAGGCC GTCATCCGGT CAGCCCGTGG GGCGTTCCCA CCAAGGGTCA CCGCACCCGC
AATCCGAAGA AGGCGTCGAG CCGCCTGATC ATCCGTCGCC GCAAGAAGTA A
 
Protein sequence
MGVKQYKPTS PGRRFQTVSD FAEITTDKPE KSLLAPLPKK AGRNNNGRIT TRHQGGGNKR 
RYRIIDFKRN KDGVPAKVAT IEYDPNRSAR IALLHYVDGE KRYILHPKGL QVGDMVVSGP
NADIKPGNAM PLADIPVGTL IHAVELQPGR GAALARSAGT SIQLMGKEGN YAILRMPSSE
MRRVLLTCRA TIGEVGNADH ANVKIGKAGR NRWKGIRPTV RGTVMNPVDH PHGGGEGKNK
TAGRHPVSPW GVPTKGHRTR NPKKASSRLI IRRRKK