Gene Shel_23310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23310 
Symbol 
ID8396220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2585391 
End bp2585759 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content61% 
IMG OID644987078 
ProductLSU ribosomal protein L18P 
Protein accessionYP_003144689 
Protein GI257065017 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00313023 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000983895 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGAAAC TTCAGAAGAA ACAAGCTGCG TTGGCTCGTC GTCACCGTCG CGTTCGCGGC 
AAGGTCTCCG GTACCGCCGC TCGTCCGCGC CTTTGCGTGA CCCGTTCCAA CTCTAACATC
TACGTTCAGT TCGTCGACGA CGTCGAGGGC AAGACTCTCT ACGGCGAAAG CACCCTGGGT
GCGGACTTCA AGGCCACCGG CAAGTCCGGT GCCACCGTTG AAGGCGCCGA GGCTCTGGGC
CAGATCGTCG GCAAGAAGGC AATCGAAAAG GGCATCACCG AGATCGTTTT CGACCGCGGT
GGCAACCTGT ACCACGGCCG CGTCAAGGCT CTCGCTGAAG GCGCCCGTGA AGCCGGCTTG
AAGTTCTAG
 
Protein sequence
MQKLQKKQAA LARRHRRVRG KVSGTAARPR LCVTRSNSNI YVQFVDDVEG KTLYGESTLG 
ADFKATGKSG ATVEGAEALG QIVGKKAIEK GITEIVFDRG GNLYHGRVKA LAEGAREAGL
KF