Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22180 |
Symbol | |
ID | 8396107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2454883 |
End bp | 2456181 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644986966 |
Product | DNA repair nucleotidyltransferase/DNA polymerase |
Protein accession | YP_003144577 |
Protein GI | 257064905 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000141857 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0200421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAAC GCGTTGTTCT GCACGTTGAT ATGAACGCGT TCTATGCGTC GGTCGAGCAG CATAAAAATC CATCCCTCAG AGGCCGGCCC ATAGCGGTCG CAGGCAATCC AGAGCGCCGC AACGGCATCA TCCTTGCGAA AAGCCGCGAG GCGAAAGCGT GCGGGGTCAA AACGGCCGAG GCCTTATGGC AGGCGAAGGA GAAATGCCCG GATATCATCT TCGTACCGCC TGATTACCGA TCCTACCTGC GGTATTCTCG CTTCGCCAGG CAGATTTACT ACCAATATTC CGACCAGGTC GAACCTTTCG GATTGGATGA AAGCTGGATC GAGCTCACCC ATACGCTGCA CCTCCATGGC GGAGATGCCA TGCTCGTTGC GGAAGAAATC AGCGAACGCA TCAAAGCGGA GCTGGGGCTT ACCGTATCGG TAGGTGTGTC GTTCAACAAA GTGTTCGCCA AGTTCGGAAG CGACACCGAT CCGGGCGACG GCATCATGCG TATAACTCCG CGCAACTTTC GAAGCATCGT ATGGCCGCAC CCGGTCGATG AGCTCATCTA CGTAGGGCGC GCCACCAAAT CGAAGCTGAA CTCCTCTGCG GTATTCACCA TCGGGGATCT GGCCTGCGCC TCCGACACGC TGCTGCAGCG GCGGCTTGGC AAGATGGGCG GCATCATCAA GATGTTCGCA AATGGCCAGG ACATAAGCCC CGTCAAGGTT ATGGATCCCG CGAAAGCCGA TGCGGACTAT GCCATCAAAT CCATTGGCAA CGGACTCACG GCACCGCACG ACCTCGTGAC CGAACGAGAG GCGAAAGCCC TCATATACTT GCTATCCGAA TCGGTTGCGC AGCGGCTGAG GGAATGCCGG ATGCGGGCGC GCACCATCGC CATCAGCGTC AGAGGGCATG ACCTGCTGGG CTACACGCGG CAGGCGCCGC TGCCTGCTCC CAGCAACATC ACCGAAGAGC TTTCCCGCGC GGCGTTCGCC CTGCTTCGAG CGAACGAACC CCTCGACCGT ATCCATCCCG TGAGGGCCTT GGGCGTGCGG GCGTGCAACC TGGTTTCGGC CGACCTTCCT GTACAGGAAG ACCTGTTCGG CGATGTGGCG GCCCGGGAAT CGCTTGAGCG GTTAGACGCC ACCATCGACG ACCTGCGACG GCGTTTCGGA AACGGATGCG TGAAACGCAT GGTGGAGCTT TCGGACGAAG CCATGGCTGG CCTCGATATC AAACGGGACA ACATCATCCA CCCCGTCGGG TTCTTCGCGC CCGACGCCCA TAGCAGGAGC GCCTCATGA
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Protein sequence | MTERVVLHVD MNAFYASVEQ HKNPSLRGRP IAVAGNPERR NGIILAKSRE AKACGVKTAE ALWQAKEKCP DIIFVPPDYR SYLRYSRFAR QIYYQYSDQV EPFGLDESWI ELTHTLHLHG GDAMLVAEEI SERIKAELGL TVSVGVSFNK VFAKFGSDTD PGDGIMRITP RNFRSIVWPH PVDELIYVGR ATKSKLNSSA VFTIGDLACA SDTLLQRRLG KMGGIIKMFA NGQDISPVKV MDPAKADADY AIKSIGNGLT APHDLVTERE AKALIYLLSE SVAQRLRECR MRARTIAISV RGHDLLGYTR QAPLPAPSNI TEELSRAAFA LLRANEPLDR IHPVRALGVR ACNLVSADLP VQEDLFGDVA ARESLERLDA TIDDLRRRFG NGCVKRMVEL SDEAMAGLDI KRDNIIHPVG FFAPDAHSRS AS
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