Gene Shel_21980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21980 
Symbol 
ID8396087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2438433 
End bp2438825 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content62% 
IMG OID644986946 
ProductSSU ribosomal protein S9P 
Protein accessionYP_003144557 
Protein GI257064885 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000149562 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00529045 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGGTG AAGCAATTTA CTACGGCACT GGCCGTCGCA AGAACGCCGT TGCTCGCGTC 
CGCTTGGTCC CCGGCACCGG CAAGGTCACG GTCAACGGCC GTGAAGCTGC CCAGTACTTC
GGCCGCGAAG CCCTGGTTGA TTACGCCATG GCACCGTTCA AGGTAACCGA CACCATGGGT
CATTTCGACG TCATCGCTCG TTGCAATGGC GGCGGAATTT CCGGACAGGC TGGCGCTCTG
CGTCACGGCA TCAGCCGTGC GCTGCTCGAG GCCGGCGAGT ATCGTCCCGA GCTCAAGAAG
GCTGGCTTCC TGACCCGCGA CCCTCGTATG GTCGAGCGCA AGAAGTACGG TCTGAAGAAG
GCCCGCAAGC GTCCGCAGTT CTCCAAGCGC TAA
 
Protein sequence
MAGEAIYYGT GRRKNAVARV RLVPGTGKVT VNGREAAQYF GREALVDYAM APFKVTDTMG 
HFDVIARCNG GGISGQAGAL RHGISRALLE AGEYRPELKK AGFLTRDPRM VERKKYGLKK
ARKRPQFSKR