| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21930 |
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| Symbol | |
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| ID | 8396082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2431940 |
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| End bp | 2432899 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644986941 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_003144552 |
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| Protein GI | 257064880 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00246187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTGACCG AGATGACGAA GGAGATGGCA ATTTTCAGCG GTTCGGTGAA TCCGAAGCTT
GCTGAGGAGA TCGCCGATCA GTTGGGCATG CCGTTGGGCA ACATCAAACA CGAGAAGTTC
GCGAACGGCG AAATCTACTG CCGCTACCTC GAGAACATCC GCGGCGATGA CGTGTTCTTG
ATCCAGTCCG TCGCCGGCGA GCACATCAAC GACGCGCTCA TGGAGCTGCT CATCATGATC
GATGCTGCCA AGCGCGCATC CGCCCGCTCC ATTTCGGCCG TCATCACGCA TTACGGCTAC
GCTCGTCAGG AGCGCAAGGC TTCTCCCCGC GAGCCCATTA CGGCGAAGCT TGTTGCCGAC
ATGCTTCAGG TCGCCGGTAT TTCGAACATC ATCACCATCG ACCTGCATGC GGCTGCAACC
CAGGGCTTCT TCAACGTCCC GGTGAACCAC ATGACTGCAC TGCCGATTTT TGTTGACTAC
TTCAAGCAGA AGGGCTTCGA CCCCGCGAGC CTGTGCGTGG TGTCGCCTGA TGTGGGTCGC
GCCAAGGAAG CCAAGAAGAT GCAGATGCGG CTCGATTCCG ACATCGCCAT CATGCATAAG
GACCGCCCGC GCCACAACCA GGCCGAGATT ACCGCGCTCA TCGGCGACGT CGAGGGCAAG
ATCTGCATCA TCAACGACGA CATGATCGAC ACGGCCGGAT CCCTGGTGGC CGCCGCCGCA
ACGCTGAAGG CAAAGGGTGC CGAGCGCATC TTCGCTTGCG CGACGCACGG CATCTTCAGC
GGTCCCGCTT ACGATCGTAT CGAGAACTCG ATCATCGAAG AGGTCGTCGT CTCCAACACG
ATTCCTGTTC CGCTGGAGCG TCAGACTGGC AAGATAAAGG TGCTGTCCGT GGCGCCGCTG
CTTGCCAAGA CCATGAAGGC CGCTTACGAG AACGGGTCGA TTTCCGCCCT GTTCAACTAG
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| Protein sequence | MLTEMTKEMA IFSGSVNPKL AEEIADQLGM PLGNIKHEKF ANGEIYCRYL ENIRGDDVFL
IQSVAGEHIN DALMELLIMI DAAKRASARS ISAVITHYGY ARQERKASPR EPITAKLVAD
MLQVAGISNI ITIDLHAAAT QGFFNVPVNH MTALPIFVDY FKQKGFDPAS LCVVSPDVGR
AKEAKKMQMR LDSDIAIMHK DRPRHNQAEI TALIGDVEGK ICIINDDMID TAGSLVAAAA
TLKAKGAERI FACATHGIFS GPAYDRIENS IIEEVVVSNT IPVPLERQTG KIKVLSVAPL
LAKTMKAAYE NGSISALFN
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