Gene Shel_21460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21460 
Symbol 
ID8396035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2383155 
End bp2383958 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content58% 
IMG OID644986894 
ProductF0F1-type ATP synthase, alpha subunit 
Protein accessionYP_003144505 
Protein GI257064833 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGG CTCTTGCTGC GTTTGTCGAA GAAGCGCAAC ACATCTTCGA ACATTTCGAG 
CCGACCACGG TGTTCAGTAT CGGGCCGTGG AACGTCACGC AATACGTCGT GTGGCTGTTT
ATCGGCTTCT TTGTCACGCT TGCTGTGGTG TTGGTTGCGG CCAAGAATTC CAAACTGGTG
CCCGACAACA AGTTCGTGAA CATCGTCGAG TTCGGTTATG ACTTCGTGAG TAAGAACATC
GGTGAGGACG TCATCGGCAG CGGCTTCAAG CAGCACGTGC CGTTCCTCGC AACGCTGTTC
TTCTTCATCC TGGTCTGCAA CGTGCTGGGT CTGGTTCCCG GCTTCAAGAC CTCCACGGGC
ACCATCTCGT GCACGTGGGC CCTTTCGGTC ATCTCGTTCG TGTACTTCCT GTACTGGGGC
ATGAAAGAGA ACGGTCTGCT GAAGTACTGG GTCACCCTGT GCCCCCACGG AGTGCCGAAA
CCCATGGCTC CCATCATCTG GTTCCTGGAG CTGTTCTCCA CCATGATTCG CGTGCTCACG
CTGGCCGTCC GACTTTACGG CAACATGCTC GCCGGCCATA TGATCCTCGG CGTGTTCGGC
ATCGCCACCA GCACCTTCGT GCTGTATGCC GTGATGTCCG CCACCAGCGC CGTGGCAGCT
GTGGCGACGG GCGCAACCTC CGTCGTGTGG TTCCTGCTGC TGGTCATCAT GTACGCCCTG
GAATGCCTGG TCGCGTTCCT GCAAGCGTTC GTGTTCGCCA TCCTGTCGTC GTCCTACATC
TCCGGTGCGG TTCATCCTCA CTAG
 
Protein sequence
MGEALAAFVE EAQHIFEHFE PTTVFSIGPW NVTQYVVWLF IGFFVTLAVV LVAAKNSKLV 
PDNKFVNIVE FGYDFVSKNI GEDVIGSGFK QHVPFLATLF FFILVCNVLG LVPGFKTSTG
TISCTWALSV ISFVYFLYWG MKENGLLKYW VTLCPHGVPK PMAPIIWFLE LFSTMIRVLT
LAVRLYGNML AGHMILGVFG IATSTFVLYA VMSATSAVAA VATGATSVVW FLLLVIMYAL
ECLVAFLQAF VFAILSSSYI SGAVHPH