| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21360 |
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| Symbol | |
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| ID | 8396025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2370259 |
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| End bp | 2371074 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644986884 |
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| Product | pseudouridylate synthase I |
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| Protein accession | YP_003144495 |
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| Protein GI | 257064823 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0418388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCG AACAGAACAT ACCTCAGCCT GAAAACCTGT CTCGCACCTT GGCGTGCAAG
GTGGCCTACG ACGGCGCACC CTTCGCGGGG TTCGCACGCC AGGCCGAATG CGACCGTGTC
ATGACCGTGC AGGGCGAACT GGAGCATGCC CTGCGGGTGC TGTACCGCCG CGACGTGCGC
ACGACCTGTG CAGGACGCAC CGACGCCGGC GTGCACGCCA TCGGCCAGGT GGTGAGTTTC
GACGTGACCG AGGACGAGTT CGCCTCGCGC ACGCCGCGTT CGCTTCTGCG TTCGCTCAAC
GCCTTGGTGG ACGACCACAT GTCCGTGTCT GTGGTGGAGG AAAAGCCCTT CGGGTTTTCG
GCCCGCTTCG ATGCGAAATG GCGCGAATAC CGCTACCGTA TCTCCACGGC TGCCGCACGG
CCTGTGCTCA TCATGCCTTT GGTCTGGCAC CTGGGCGGGG TCGATTTGGA CATCGACGCC
ATGAACCGTG CTGCCGTGCA CCTGATCGGT GAGCATGATT TCAAGAGCTT CTGCGTGGCG
GCTTCGGCTG TGGGCAAGCC CACGTGCCGC AACGTCATGG AGCTTGAGGT GTTCGAAGAG
GAGATTCTTG GCCAACAGGT GGCAACCGTC CGCGTTGTGG GCAATGCGTT TCTGCATTCC
ATGGTGCGCA CCATAGTGGG AACCCTGGTG GAGGTCGGCC GCGGCAGACG CAACCCTGAA
TGGGTGTGCG ACGTGCTTGA GGCCCGCAAT CGCGGTGCCG CAGGACAGAA CGCTCCGGCC
CAGGGTCTCG TGTTCTGGCA TGTGGAGTAC GAATGA
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| Protein sequence | MDFEQNIPQP ENLSRTLACK VAYDGAPFAG FARQAECDRV MTVQGELEHA LRVLYRRDVR
TTCAGRTDAG VHAIGQVVSF DVTEDEFASR TPRSLLRSLN ALVDDHMSVS VVEEKPFGFS
ARFDAKWREY RYRISTAAAR PVLIMPLVWH LGGVDLDIDA MNRAAVHLIG EHDFKSFCVA
ASAVGKPTCR NVMELEVFEE EILGQQVATV RVVGNAFLHS MVRTIVGTLV EVGRGRRNPE
WVCDVLEARN RGAAGQNAPA QGLVFWHVEY E
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