Gene Shel_21130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21130 
Symbol 
ID8396002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2342548 
End bp2343207 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID644986862 
Productprecorrin-8X methylmutase 
Protein accessionYP_003144473 
Protein GI257064801 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2082] Precorrin isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA TGCAAACCTT GACGTTCGTG GCTCCGGCTG AAATCGAGAC CCGGAGCTTC 
CAAATCATTG GCGACGAGCT GGCGGCTAGG GGAATCAAGG TCGACCCCGA GACCGAACCT
GTGGTCAAGC GGGTCATACA TACGACCGCC GATTTCGAAT ACGCCGAAAC GCTGCGGTTC
TCCGAAGGCG TGGTTCCGCA GTCCGTCTTA GCGCTGCGCG ACGGGTGCCA TGTGGTGACC
GACACGTCCA TGGTGGCGGC GGGCATCAAC AAGCGGGTTC TTGGCCGCTT CGGCGGGCAG
GTGCACACCT TCGTGGCCGA TGCGGATGTG GCCGCCGAGG CCAAAACCCG GGGCATCACC
CGCTCGGCGG TGGCCATGGA ACGTGCGGCC GCGCTGCCAG AACCGCCGAT CTATGCGATC
GGCAACGCCC CCACGGCCCT GGTGCAGCTT GCCGACCTGG TTCAAGCCGG CAAGGCCCCC
ATGCCGCGGC TGGTCATCGG CGTGCCCGTA GGGTTCGTCA ACGTGGTCGA ATCCAAGGAG
CTCATCATGG GGCTGGGATG CCCCTACATC GTTGCCGTGG GCAGGAAGGG CGGCAGCAAC
GTGGCGGCGT CCATCGTGAA CGCCCTGCTG TACCTGGCAT CCGACGGAGC GCGCGATTAA
 
Protein sequence
MTQMQTLTFV APAEIETRSF QIIGDELAAR GIKVDPETEP VVKRVIHTTA DFEYAETLRF 
SEGVVPQSVL ALRDGCHVVT DTSMVAAGIN KRVLGRFGGQ VHTFVADADV AAEAKTRGIT
RSAVAMERAA ALPEPPIYAI GNAPTALVQL ADLVQAGKAP MPRLVIGVPV GFVNVVESKE
LIMGLGCPYI VAVGRKGGSN VAASIVNALL YLASDGARD