Gene Shel_21100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21100 
Symbol 
ID8395999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2340132 
End bp2340905 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content62% 
IMG OID644986859 
Productcobalamin-5-phosphate synthase 
Protein accessionYP_003144470 
Protein GI257064798 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT GGCGCTCCAT TATCATGGCG TTCTCCATGT TCTCGTCTAT CCCCATGCCC 
ACAATCGAGT GGAAGCCTCA GAACCAGCGC TACATGATGG CGGCGTTTCC CCTGGTAGGC
ATCGTAATCG GTGCCTGTCT TGCCCTGTGG TGCTGGGCGT GCTTCAAGCT GGGGGTGGGG
CCGGTGTTCA CGGCCGCGGG CATCACGGTG CTGCCCATCC TGCTTTCTGG CGGCATCCAT
ATGGACGGAT TCTGCGACGT GGCCGACGCC CAAGGCAGCA ACGCCACGTT TGAACGCAAG
CGTGAGATCT TGAGCGACTC CCGATCGGGC GCCTTCGCCG TGTTCTCCGT CGGCATATAT
TTGATTTCGT ATTTGGGCGT GGCGACCGAG CTTCCGCTAG GCATGCGGAG CGTGGCGCTG
CTGGCTCTGA TTCCGGTGTA CAGTCGCGTG ATGTCGGGCA TCGCCACCCT CGTGCTCCCC
AAAAGCACCG ACGACGGCAT GCTCTCGTCG TTCTCGTTCT CCGCGAAAAC CCGCATCACC
GTGGCCGTCC TTCTGGGGTG GGCGTTTGTC TGTATGGCCG CAGCTCTTGC GGCGTCGGCC
CCCTGCGGAT TCGCGGTGGT CGCAACGGGG CTCATCGGTT TCGCTGCGTT CTGGCGGTTC
GCCCGCGAGC AGTTCGGCGG CATAAGCGGC GATTTGGCGG GGGCGTTTTT GCAGGTGCTC
GAGCTGGCCA TGCTGCTTGT CCTGGTGCTT ACCTTGAAGC TGGTGGGCCT ATGA
 
Protein sequence
MNAWRSIIMA FSMFSSIPMP TIEWKPQNQR YMMAAFPLVG IVIGACLALW CWACFKLGVG 
PVFTAAGITV LPILLSGGIH MDGFCDVADA QGSNATFERK REILSDSRSG AFAVFSVGIY
LISYLGVATE LPLGMRSVAL LALIPVYSRV MSGIATLVLP KSTDDGMLSS FSFSAKTRIT
VAVLLGWAFV CMAAALAASA PCGFAVVATG LIGFAAFWRF AREQFGGISG DLAGAFLQVL
ELAMLLVLVL TLKLVGL