Gene Shel_20990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20990 
Symbol 
ID8395988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2329149 
End bp2330819 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content65% 
IMG OID644986848 
ProductFormate-tetrahydrofolate ligase 
Protein accessionYP_003144459 
Protein GI257064787 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2759] Formyltetrahydrofolate synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGTACA AATCCGACAT CGAGATCGCG CAGGAATGCG AGATGCTGCC CATCGAAGAG 
GTGGCGAAAA AAGCCGGCAT CGATTGGGGC ACCTGCGAAC CTTACGGCCA CTACAAGGCC
AAGGTGGACA TCCATTCTTA CAAGGATGCG CCCATGAAGG GCAAGCTCAT CCTGGTCACG
GCGATCAACC CTACGCCGGC AGGCGAGGGC AAGACCACCA CGAGCGTCGG CCTGCACGAC
GCGCTGTGCA AGACGGGCCG AAGCTCCATG CTGGCGCTGC GCGAGCCTTC GCTGGGCCCT
GTGTTCGGCG TCAAGGGCGG CGCTGCAGGC GGCGGATACG CCCAGGTCGT TCCCATGGAG
GACATCAACC TGCACTTCAC CGGCGACTTC CATGCCATCG GAGCCGCCAA CAACCTGCTC
GCGGCCATGC TGGACAACCA CATCAAGCAG GGCAACGAGC TTGACATCGA TTTGAACAAC
GTCATCTGGC GCCGCTGCGT CGACATGAAC GACCGCCAGC TGCGCAACGT GGTGGACGGT
TTGGGTTCGG CCGCAGACGG CGTGGCCCGC GAGGACGGCT TCGACATCAC CGTAGCCTCC
GAGATCATGG CCGTGTTCTG CCTGGCCACC GACCTGGCCG ACCTCAAGGA GCGCCTGGGC
CGCATCATCG TGGCCTACAG CCGCTCGGGC AAACCCGTGA CCGCCGCCGA CCTGAACGCC
CAGGGCGCCA TGACGGCCCT GCTCAAGGAT GCCATCAAGC CGAACCTGGT GCAGACCCTC
GAAGGCAATC CCGCCTTCGT GCACGGCGGC CCCTTCGCCA ACATCGCCCA CGGCTGCAAC
ACCGTTCAGG CTACCACCAC GGCCCTCAAG ATGGCCGACT ACGTGGTCAC CGAGGCCGGC
TTCGGCGCTG ACCTGGGAGC CGAGAAGTTC TTGGACATCA AATGCCGCAT GGCGGGGCTC
GTTCCGTCCT GCGTCGTGAT TGTGGCCACC GTCCGCGCCC TGAAGTACAA CGGCGGCGTG
GCCAAGGCCG ATCTGAACAA CGAGAACCTC GAGGCCCTGG AGGCCGGCCT GCCCAACCTG
CTGCAGCACG TCGGCAACAT CCAGAACGTC TACGGCCTGC CCGCCGTGGT GGCCATCAAC
GCGTTCCCGA CGGACACCCA GGCCGAGTTG GAACTCGTCC AAGCCAAGTG CAAGGAGCTC
GGCGTGAACG CCGTTCTGGC CGAGCATTGG GCCAAGGGCG GCGAAGGCGC CATCGCCCTG
GCGGACGAGG TCGTTCGCGC CTGCGAACAG CCCGCTGACT TCCGTTTCAG CTACGACGTC
GAGGACTCCA TCGAGGAGAA GCTCAACGCC ATCGCCACCA AGGTCTACCA TGCCGACGGC
GTGGACTTCA CCCCGAAGGC CAAAAAGCAG CTCGACCAGC TGGTGGCTTT GGGCCTGGAC
AAGCTGCCCA TCTGCGTCGC CAAGACCCAG TACTCCTTCA CGGACGACCA GACCAAACTG
GGTGCACCGC GCGACTTCCG CATCACGGTG CGCAACCTGA AGATCTCTGC CGGCGCCGGC
TTCATCGTGG CGCTCACCGG CGAGATCATG ACCATGCCCG GTCTGCCCAA GCGTCCCGCA
GCCGAGCGCA TCGACGTGAC TCCCGAGGGC AAGATCGTCG GCCTGTTCTA A
 
Protein sequence
MEYKSDIEIA QECEMLPIEE VAKKAGIDWG TCEPYGHYKA KVDIHSYKDA PMKGKLILVT 
AINPTPAGEG KTTTSVGLHD ALCKTGRSSM LALREPSLGP VFGVKGGAAG GGYAQVVPME
DINLHFTGDF HAIGAANNLL AAMLDNHIKQ GNELDIDLNN VIWRRCVDMN DRQLRNVVDG
LGSAADGVAR EDGFDITVAS EIMAVFCLAT DLADLKERLG RIIVAYSRSG KPVTAADLNA
QGAMTALLKD AIKPNLVQTL EGNPAFVHGG PFANIAHGCN TVQATTTALK MADYVVTEAG
FGADLGAEKF LDIKCRMAGL VPSCVVIVAT VRALKYNGGV AKADLNNENL EALEAGLPNL
LQHVGNIQNV YGLPAVVAIN AFPTDTQAEL ELVQAKCKEL GVNAVLAEHW AKGGEGAIAL
ADEVVRACEQ PADFRFSYDV EDSIEEKLNA IATKVYHADG VDFTPKAKKQ LDQLVALGLD
KLPICVAKTQ YSFTDDQTKL GAPRDFRITV RNLKISAGAG FIVALTGEIM TMPGLPKRPA
AERIDVTPEG KIVGLF