Gene Shel_20980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20980 
Symbol 
ID8395987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2328379 
End bp2328852 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content59% 
IMG OID644986847 
Producthypothetical protein 
Protein accessionYP_003144458 
Protein GI257064786 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGC AGTTTTCTAT GGAATGGGCG CGCGACATCC TGAACAAGGG CATGGCGAAG 
GCGCAGAGCA TCGTCGAGGA TCCGGCCCAG GTCGAAGAGC TTTTGGCGAA GCTCCAGGAG
AAGATGAACG GCCTGCCCGA CACCGTTTCG GCGGCGTTCA CGAACGTGCC GGTGATGGCT
GCCATGGTGA AAAGCTACAT CACCAGGGAA TACACCGATG TATCGCCGAA GGTCATCGTG
TCGCTGGTGG GTGCCTTCCT CTACCTGGTG AAACAGAAGG ACATCATCCC CGATGACATC
CCGGTCGTTG GTTTTGCAGA TGACCTTGTC ATCGCCACGT TCGTCATGGC CATCAACGAG
CCCGAGCTTC GTGCGTTCTC CGAATGGCGC GACGCCCGCG CGGCTGCTGC GGCCGAGGAC
GTGCAGAGCG TCGAACCCGT TGAGATCATC GATGTGCCGA TTGCCGAGGC ATAG
 
Protein sequence
MAQQFSMEWA RDILNKGMAK AQSIVEDPAQ VEELLAKLQE KMNGLPDTVS AAFTNVPVMA 
AMVKSYITRE YTDVSPKVIV SLVGAFLYLV KQKDIIPDDI PVVGFADDLV IATFVMAINE
PELRAFSEWR DARAAAAAED VQSVEPVEII DVPIAEA