Gene Shel_20870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20870 
Symbol 
ID8395976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2319531 
End bp2320145 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content63% 
IMG OID644986836 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003144447 
Protein GI257064775 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTA ACGCTATGGT AGTCGACCTC AACCGCTGCA TCGGATGCTA CGGTTGCGAG 
GTTGCTTGCA AACAAGAACA TGATGTCGCT CTGGGCGAGT ATTGGTGCAA GGTCTACACC
GACGGCCCCC AGGGCACCCA TCCGCACATC ACGCAGTATT GGCTGCCCAC CCTGTGCCAG
CAGTGCGAGA ACGCACCCTG CATCGAGGTG TGCCCCACCG GCGCCAGCCA GCGCGATCCT
GTCACCGGCG TGGTCATCAT CGACCGCGAG ACCTGCATCG GCTGCAAGAG CTGCCTGACG
GCATGCCCCT ACGGCGTCCG CAGCTACAAC GCCTCCACCA ACACGGTGGG CAAGTGCACG
CTGTGCAACG ACCGCCTGCG CAACGACAAG CTTCCCGCTT GCGTGCTGGC ATGCTCGGGC
CAGGCGCGCT TCTTCGGCGA CCTCGACGAT CCCGAAAGCG CCGCCTCGAA GGCCCTGGCG
GCCCACGACG AGGCTGACAT CCACCAATTC GCCGATTCCG GCAACGCCCC GCTGACCCGC
TACATTCTCT CCGAGAAGTA CGCCGAGTGG ATCAGCGACG ATTGGTACGG CCTTGACATG
TACACGCTAG AATAG
 
Protein sequence
MTRNAMVVDL NRCIGCYGCE VACKQEHDVA LGEYWCKVYT DGPQGTHPHI TQYWLPTLCQ 
QCENAPCIEV CPTGASQRDP VTGVVIIDRE TCIGCKSCLT ACPYGVRSYN ASTNTVGKCT
LCNDRLRNDK LPACVLACSG QARFFGDLDD PESAASKALA AHDEADIHQF ADSGNAPLTR
YILSEKYAEW ISDDWYGLDM YTLE