Gene Shel_20470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20470 
Symbol 
ID8395936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2276338 
End bp2276757 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content68% 
IMG OID644986796 
Producthypothetical protein 
Protein accessionYP_003144408 
Protein GI257064736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.430543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.230727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCG CACTGCTCAT TCCCGTAGAC GACGCCCCGC GCCCCGTCGA CGTCGACGGC 
CTTCGTGACC TGCAACGCCT CGTGGGAGGC GACATCGAAG CCGTCGGCTG GGTCTTCGAC
GACGCCCCGA CCATCTACGT CAACGAATCC GGCAAATTCG ATGGCCTGCC TCCGAACAGG
GCGATCTTCG CCGAACACCC CGGCACGCGC TGGGACGGCA GCCCCATCCG CGTCGGCGAC
CTCCTCGACG TTCTCTACGG ACCGATCGTG GCCGTGGGCT TCGACCCCGC CACGGGCGAG
GACCGCGACA TCAACGACGC CGAGGCTGCC CGCATCATGT CCCGCTTCGG CGAGAACAGC
ATCGGCAGCG GCCTCCTCGC CACACTCGGC GTCCGCCTCG TCGCCCGATA CGCGGAGTAG
 
Protein sequence
MTRALLIPVD DAPRPVDVDG LRDLQRLVGG DIEAVGWVFD DAPTIYVNES GKFDGLPPNR 
AIFAEHPGTR WDGSPIRVGD LLDVLYGPIV AVGFDPATGE DRDINDAEAA RIMSRFGENS
IGSGLLATLG VRLVARYAE