Gene Shel_20050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20050 
Symbol 
ID8395894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2241215 
End bp2243464 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content60% 
IMG OID644986756 
Productferrous iron transporter FeoB 
Protein accessionYP_003144368 
Protein GI257064696 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.558981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.661098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCC GTATTGCTCT TGCCGGCAAC CCGAACTGCG GCAAGACGAC GTTGTTCAAT 
GCTCTCACTG GTGCAAGCCA ATATGTCGGC AACTGGCCTG GCGTAACCGT TGAGAAGAAG
GAGGGTAAAT ACAGCAAAGA TCATGATGTG ACCATCACTG ACCTGCCTGG TATTTACTCC
CTGTCCCCCT ATTCGCCCGA GGAAGTCGTT GCACGCGACT ACCTGGTTGA TGAACGCCCC
GACTGCGTTA TCAACCTGGT CGACGCCACC AACCTCGAGC GCAACCTGTA TCTGACCACT
CAAATCGTCA ACCTGGGTCT CCCCGTGGTC GTCGCCATGA ACATGGCCGA CCTCGTCGAG
AAGAACGGCG ACAAGATCGA TTTCGACGGT CTGTCCAAGC GTTTGGGCTG CCCCGTCATG
TCCATCAGCG CTCTGAAGAA CACAGGCGTC GACGAGCTGC TGCAGACCGC CATCGCTACG
GGCAAGGCCG GTGTGCCTGC GGCTCCGACG TTCCAGTTCG ACGCTGCTTT CGAAGACGGC
CTGTCCGAAA TCGAATCCGC GCTGTCTGTT TCCGAGCACC TGAAGCGCTG GTATGCCATC
AAGCTGTTCG AGAACGATGA GCGCGCCATC GCCAAGGTCA ATCCGTCCAA GGATGTCCTG
GCCAAGGTCG CTGCAGTTCG CAGCACCCTG GAGTCTAAGT TCGACGACGA CGCCGAGAGC
CTCATCACTT CCGAGCGCTA CGACGCCATC GCCCACATCG TGGACGAAAC GGTCAAAAAG
TCTGGCAAGA CCCTGACCAC CACCCAGAAG ATCGACCGCA TCGTGACCAA CCGCTGGCTG
GGCCTGCCCA TCTTCATTCT GGTCATGTTC GTCGTCTACT ATGCCGCCTG TACCGTCGGT
GGCGGCGTCG TTACCGACTG GGCCAACGAC GGCATCTCCG GCGACGGCTG GATTTACACC
CCTGGCGGCA TGGAAGCCTG GGATGAGGAA AGCGGCGAAG CCGAGACAAT GGGCGATTAC
GGCCTGTACA TCCCCGGCCT TGGCCTCATC ATCGGCAATG CCCTCGAGGC ATCCGGTGTC
GCCGATTGGC TGCAGAGCTT GATCATGGAC GGCATCGTCG CAGGTGTCGG CGCCGTTATC
GGCTTCGTTC CTCAGATGAT CATCCTGTTC CTGCTGCTGT CGTTCTTGGA AGGCTGCGGT
TACATGGCGC GTGTCGCGTT CATCATGGAC CGTATCTTCC GCCGCTTCGG CCTGTCCGGC
AAGAGCTTTA TCCCGATGCT CATCGCATCG GGCTGCGGCG TGCCCGCCGT CATGGCTACC
AAGACCATTG AGAACGAGAA GGACCGTCGC ATGACGATCA TGACCACCAC GATGATTCCC
TGCGGCGCGA AGCTGCCCAT CATCGCTCTG GTCTTCGGCG CTCTGGCCTC TGCTGAGTAC
GAATCCGTCT GGTGGGTCGG CCCCATGTTC TACTTCCTGG GCGTTGCCGC CATCATCATC
TCCGGCATCA TGCTGCGCAA GACCCCCTAT TTCGCAGGTG AAGCCACTCC GTTCATTATG
GAACTCCCTC AGTACCACAT CCCGACCGTC CGCTCCGTCT TGCTGGCGAC CTGGGAACGC
GTCAAGAGCT ACATCATTAA AGCAGGTACC ATCATCTTCC TGTCCTCTAT CGTCATCTGG
TTCCTCCTGA ACCTGGGCGT GGCTGATGGC CACTTCGGCA TGGTCGACAT CGAAGACAGC
TTCATGGCCG GCCTCGGCAC CATCCTCGCA CCGCTGTTCG CTCCTCTGGG CTTCGGCTCT
TGGAAAGCGG TCGCAACCTC CGTCACCGGT CTGGTTGCCA AGGAGAACGT CGTCGCCACC
GTTGCTACCC TGACCGCTCT TGAGGACCTG GGCGAGACCG ACCCCGGTCT GTGGAAGGGC
TTCGCTGCCA TGCTCGGCGG CTCCGCTCCC GCCATCATGT CCTTCTGCGC GTTCAACCTG
CTGTGCGCCC CCTGCTTCGC TGCCATCGGC ACCATCTATC GTCAGATGGT TTCTGGCAAG
TGGACTTGGA TTGCCATCGG CTACATGTGC GGCTTCGCTT ACTGCGTCGC ATTGATGGTC
TATCAGTTCG GCATGCTGTT CACTGGCGGC GGATTCGGCA TTGGCACGGT CTTCGCCATC
GTGGTCTTGG CTGCCCTGCT GTTCCAGATC TTCCGTCCCA TGCCCAACTA TGACAAGAAG
GGTACTGAGA CGGCCGCCGA CGCCGCTTAG
 
Protein sequence
MAIRIALAGN PNCGKTTLFN ALTGASQYVG NWPGVTVEKK EGKYSKDHDV TITDLPGIYS 
LSPYSPEEVV ARDYLVDERP DCVINLVDAT NLERNLYLTT QIVNLGLPVV VAMNMADLVE
KNGDKIDFDG LSKRLGCPVM SISALKNTGV DELLQTAIAT GKAGVPAAPT FQFDAAFEDG
LSEIESALSV SEHLKRWYAI KLFENDERAI AKVNPSKDVL AKVAAVRSTL ESKFDDDAES
LITSERYDAI AHIVDETVKK SGKTLTTTQK IDRIVTNRWL GLPIFILVMF VVYYAACTVG
GGVVTDWAND GISGDGWIYT PGGMEAWDEE SGEAETMGDY GLYIPGLGLI IGNALEASGV
ADWLQSLIMD GIVAGVGAVI GFVPQMIILF LLLSFLEGCG YMARVAFIMD RIFRRFGLSG
KSFIPMLIAS GCGVPAVMAT KTIENEKDRR MTIMTTTMIP CGAKLPIIAL VFGALASAEY
ESVWWVGPMF YFLGVAAIII SGIMLRKTPY FAGEATPFIM ELPQYHIPTV RSVLLATWER
VKSYIIKAGT IIFLSSIVIW FLLNLGVADG HFGMVDIEDS FMAGLGTILA PLFAPLGFGS
WKAVATSVTG LVAKENVVAT VATLTALEDL GETDPGLWKG FAAMLGGSAP AIMSFCAFNL
LCAPCFAAIG TIYRQMVSGK WTWIAIGYMC GFAYCVALMV YQFGMLFTGG GFGIGTVFAI
VVLAALLFQI FRPMPNYDKK GTETAADAA