| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_20010 |
|---|
| Symbol | |
|---|
| ID | 8395890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2238553 |
|---|
| End bp | 2239581 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644986752 |
|---|
| Product | predicted metal-dependent enzyme |
|---|
| Protein accession | YP_003144364 |
|---|
| Protein GI | 257064692 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3872] Predicted metal-dependent enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACCTA AGAATACCGA TAGCGACCTG AAGCGCGCGT TCAAAGAGGA CGGCGAGCTG
AAAACCCATG TCGGCGGCCA GGCCCTGATC GAGGGCATCA TGATGCGCGG CAGGTATAAC
TGGTCGGTTG CCGTGCGTGA GCCGGACGGC AACATCTACA CTGAAGAACA CGATTTGGCA
AGCGGCCGCA AGAAGAACTC TTGGATGTAC TGGCCCATCA TCCGCGGATG CCGCGCGTTT
GTCGAGAGCC TCGGTCTTGG CTATAAGGCC CTGGAAATCG CAGCGATGCA TGCCTATGCG
GGCGAGGAGG ACTCCGAAGA GGAGGAGGAC AGCTTCGGCA AGGTAGAGAT GACCATCTCC
ATGGTGCTGG GCCTTGTTCT GGGCGTGGCG TTGTTCGTGG TGCTGCCTGC TGTCCTGTCC
AACCTTCTCG TTGGCGAATA CGATGCGCAC ACGCTCGCGT GGAACATCGT CGACGGCATC
GTACGCGTGG CCATCTTCGT CTTCTACATC TGGCTGATCG GCCGCATGCC CGACATCAAG
CGTATGTTCA TGTACCATGG CGCCGAGCAT AAGACCATCC ACTGTTACGA GCACGGCTTG
CCGCTGACTC CGGAAAACGC GCGGTCCTTC CCGCGTCTCC ATGTCCGCTG CGGTACGGCG
TTCCTTATCA TGGTCATGAT CATAGCCATC ATCGTGTACA CGCTCACGCC GCTCAACGGT
GTCATCGCAG CGCTCGGCAT TCCCAGCGGC GCCCCCAAGC TCGTATTCGT CATCTTCGTG
CGCATTCTGC TTATGCCGAT CATCGCAGGC GTCAGCTATG AGATTACGGT GAAGTGGGCT
GGAAGCCATC CTGACAATCC GCTGGTCAAG GTCATCCTGT GGCCTGGCAT GCAGATGCAG
TACCTGACCA CGAACGAGCC CGAGGACGAG CAGCTTGAAT GCGCCATTGC GGCGATGCAG
ATGGTGCTGG AGCGTGAAGA GCAGGAAGAG GCGGCCAAAC AGGAGTCGCT GGCAACGGTT
CCTGCCTAG
|
|---|
| Protein sequence | MTPKNTDSDL KRAFKEDGEL KTHVGGQALI EGIMMRGRYN WSVAVREPDG NIYTEEHDLA
SGRKKNSWMY WPIIRGCRAF VESLGLGYKA LEIAAMHAYA GEEDSEEEED SFGKVEMTIS
MVLGLVLGVA LFVVLPAVLS NLLVGEYDAH TLAWNIVDGI VRVAIFVFYI WLIGRMPDIK
RMFMYHGAEH KTIHCYEHGL PLTPENARSF PRLHVRCGTA FLIMVMIIAI IVYTLTPLNG
VIAALGIPSG APKLVFVIFV RILLMPIIAG VSYEITVKWA GSHPDNPLVK VILWPGMQMQ
YLTTNEPEDE QLECAIAAMQ MVLEREEQEE AAKQESLATV PA
|
|---|
| |