| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19660 |
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| Symbol | |
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| ID | 8395855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2200650 |
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| End bp | 2202119 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644986717 |
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| Product | amino acid transporter |
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| Protein accession | YP_003144329 |
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| Protein GI | 257064657 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.598137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.230727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACG ATCTTGTGGA TCGCGAAGAG GGGATCAACG ATCCTAACGG CCTAGGCATG
GCTCATCTCG TCGCAGCGAT CGTCACTGCG GTCGTCGGCG GCGGTGTTTT CTCAATGGTC
GGAGACATGG CCATGGCCGG GGCCCATACG GGCGCCGTCC TTATCGCATG GCTTGTCTGC
GGCGTTGGCG TTTTCTGTCT GATGATGTGC TTTTACGGCC TCAATCGGTA TCGTCCGGAA
TTGACGGGCG GCATTTTCAG CTATGCTCGT GAAGGCTTCG GAAAGTTCGT TGGCTTCGTC
TCGGTCTACA GTTACTGGGT CAGCGCATTT TTCGCAACCA TCTCGTACAC AACGCTGCTC
TTTGCGGCCA TCGGGTATTT CTTCCCGATC TTCGGCGCCG GCAACAACAT CCCGTCCATG
ATCGGCGCAT CCATCATCGT GTGGGTCTGC TGGTTTTTGG TCACGCGCGG CGTGAAAGAG
GCGGCGTCTG TCAATGTCGT CACCACCATC GCCAAAATCG TCCCGATTTT CGTCGTGGTC
GTCGCAATCA TCTTCGCCTT CAAGTTCGAT CCGGCCATCT TCGTGCAGAA CTTCTGGGGC
TCCGCCGACA GCGGTTCGGT GTATGAGCAG GTCATCAGTG TGATGAGCGT CACCGTCTGG
GTGTTTCTCG GCATCGAGGG CGCCGTGGCC ATCTCCGGTC GAGCCAAGCG CAGCCGCGAT
GTCGGTCGCG CCACTATTAC GGCGTTTCTG TGCATCCTGG CTCTGTATCT GATGATCTCC
GTCCTGTCCA TGGGCGTCAT GACGCAGGAG GAACTGGCCG AGCTGCCCAA TCCAGCCCTC
GCAGGCGTGC TTGAGGCCGT TGTCGGTCCT TGGGGCGCCA CGCTCGTGAA CTTCGGCGTC
GGCCTGTCGT TGCTGGGCTC CATGCTCGGC TACACGTTGC TGTCCGCCGA GTGCCCGCGC
GAGGCTGCCG ACCAGGGTGT TTTCCCGACC CAGTTCGCAC AGCGCAACGA AAAGAACGCA
CCGTTCTTCA CGGTCACCCT GACCTGCGCC ATCGTGCAGT TCTTCCTGAT CGTCATTATT
TTCTCTGAGA GGACCTATCA GTTCTTCTAC GGCGTGTCGC TGTCGCTGAT TCTCATTCCG
TACTTCCTGA GCTCGCTGTT CTTCTTCATC TGCGCTGTCA AGAAGCTTGG CGGCATGTCC
CACATCGCCC AGGGCAAGCT CACGTTCTAC CGTGTCATCG GCTTCATCGG TTTCGTTTAC
AGTCTGTTCC TGATTTACGC CGGCGGCCTT TCGTACTTCA TGATTACCAC CATCCTGATT
GCCCCCGGCA TCATCCTGTA TGCCATCGGC GAACGTCAGC GTGGCCTGCC CGTGCTGCCC
AACTGGTACG ACAAGGTTAT TGCCGCAGGC ATCGTCGTGC TGTTCTGCAT CAGCGTGTAC
TGCATCGTCG CAGGCATCGT CGTGGTGTAG
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| Protein sequence | MANDLVDREE GINDPNGLGM AHLVAAIVTA VVGGGVFSMV GDMAMAGAHT GAVLIAWLVC
GVGVFCLMMC FYGLNRYRPE LTGGIFSYAR EGFGKFVGFV SVYSYWVSAF FATISYTTLL
FAAIGYFFPI FGAGNNIPSM IGASIIVWVC WFLVTRGVKE AASVNVVTTI AKIVPIFVVV
VAIIFAFKFD PAIFVQNFWG SADSGSVYEQ VISVMSVTVW VFLGIEGAVA ISGRAKRSRD
VGRATITAFL CILALYLMIS VLSMGVMTQE ELAELPNPAL AGVLEAVVGP WGATLVNFGV
GLSLLGSMLG YTLLSAECPR EAADQGVFPT QFAQRNEKNA PFFTVTLTCA IVQFFLIVII
FSERTYQFFY GVSLSLILIP YFLSSLFFFI CAVKKLGGMS HIAQGKLTFY RVIGFIGFVY
SLFLIYAGGL SYFMITTILI APGIILYAIG ERQRGLPVLP NWYDKVIAAG IVVLFCISVY
CIVAGIVVV
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