| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19550 |
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| Symbol | |
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| ID | 8395844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2189190 |
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| End bp | 2190311 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986706 |
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| Product | uroporphyrinogen-III decarboxylase |
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| Protein accession | YP_003144319 |
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| Protein GI | 257064647 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.288142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000066757 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCGTG CAGAGCTCGA GAAGCTGTTC TACGATTACA AAGATGAAAT GACCCAAGGG
GAACGCGCTG CGGCGTATGC TTCCGGCGAG GAGGCGGATT ACATCCCGTT CTCCATCCAG
AGTAACGAAG AGGCCATGGC CGACCTGTTC GGATACACTA CCGCTCAGTG GCGTAACGAC
CCCAAAGTGC ACATCGACGT CATCAAACGT CGGCGCGACG AGTTCGGCAT CGTGGGTCTG
GCCGCGGGCC AGCGCTTGCG CACGGTCGGC CAGGCGGTCG GAACGAAGAT GTTCTTCCCC
GAGGTGGGCA TCGACCGAGT CGAGACGCAT GCGATACAGA CGCTTGCCGA CCTCGACAAG
GTTCTGTCCG TCGATCCGTA CACAAGCCCG GTATATCAGG CCATACTCGA GCGCGGACGC
ATCCTTAAGG ACGAGTTCCC CGAGATGGGC ATCGGAACGT CTGTCGCGGG TCCCTTCACG
GTGGCTTCGA CCATCATGCC TATCGAGCGC CTGCTGCGCG ACACACGCAA GCATCCGCAG
GCGGTGCGCG ACCTGCTGGA TTTCGCGGTG TACCATTCCG TGGCATGGGC GGAGATGTTC
GCCAAGGAGT TCGGCGGCGG CCCATGCACC ATCTGCGACC CGGTAAGCTG CGCCGACATC
CTCAGCCGCA AGCAGTATCT CGAATTCTCG ATGCCCGCGC AGGAGAAGCT CATCGAGGGT
CTGACCAAGG CGTTGGGCCG CAAACCCGGC TTGCACATTT GCGGCAAGAC CAACCCCTTG
TGGGACGACA TGGCCAACTT GAAGGTTGCG AGCTTCAGCG TCGACAACCG CGAGAGCCTC
GCTGAAGCCA AGGACCGCAT GGGTGACAAG TTCGCGCTGG TCGGCAATGT GCCTCCCGTG
GACGTCATGC TGAAGGGCTC CATTGATGAC GTTATCGAGT CGTGCAAGAA ATGCATTCGC
CAAGGTGCCG AAAGCCCGCT TGGCTACAAC CTCGGAACCG GCTGCCAGGT GCCCATCGGA
ACCCCGCGTG AAAACTTCAT GGCGTTCATC TACGCGGCCC GCACCTACGG ACGCGGCGCC
CGCAAGGGAT GCATGCCCAA GGGAATGGAA GGCCAGTTGT AG
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| Protein sequence | MDRAELEKLF YDYKDEMTQG ERAAAYASGE EADYIPFSIQ SNEEAMADLF GYTTAQWRND
PKVHIDVIKR RRDEFGIVGL AAGQRLRTVG QAVGTKMFFP EVGIDRVETH AIQTLADLDK
VLSVDPYTSP VYQAILERGR ILKDEFPEMG IGTSVAGPFT VASTIMPIER LLRDTRKHPQ
AVRDLLDFAV YHSVAWAEMF AKEFGGGPCT ICDPVSCADI LSRKQYLEFS MPAQEKLIEG
LTKALGRKPG LHICGKTNPL WDDMANLKVA SFSVDNRESL AEAKDRMGDK FALVGNVPPV
DVMLKGSIDD VIESCKKCIR QGAESPLGYN LGTGCQVPIG TPRENFMAFI YAARTYGRGA
RKGCMPKGME GQL
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