Gene Shel_19230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19230 
Symbol 
ID8395812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2156224 
End bp2157045 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content57% 
IMG OID644986674 
Productpredicted glutamine amidotransferase 
Protein accessionYP_003144288 
Protein GI257064616 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0453236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACTT TTACACCGCT TATCGGTATA GCGCCGAAAC TCGACGATAA GAACAGCATG 
ATGCATGTTC CCGTCGAATA CGTCCGGTCC ATCGTCGCCG CTGGCGCTAC GCCGCTCATT
CTCCCTTTGA CATGGGACAT GAATGCATAC GAACGACTGC TTCCATCCTG CGATGGATTC
CTGCTTTGCG GCGGTTTGGA CATCGAACCC CAGCGCTATG GCAGAGGTGA CACCCATGTG
AATCTCACAG CCCACACCCC TGGTCGCGAT GCGCTCGAAT GTCTAGTCGT CAATTACGCC
TACGAATTTG ACGTTCCGAT TCTGGGTATA TGCCGCGGCA TGCAGATGCT CAACGTTGTC
AGGGGCGGAA CCCTTCATCT CGACCTGTCC GAACGTGCCA GCTCCGAAGA AGAACACATT
GCCCACGACG CCATAGAGCA TCCTTTCGAT TACGTACACG ATGTCGATGT TGTCCCTGGC
ACGATGTTCG CCGAAATTGT TGAAGAAGAA CGCATTCCCG TGAACTCCCT TCACCATCAA
GGCGTGAACA GCCTGGGCAG GAACATGCGC GCAAGCGCCT ATGCCACCGA TGGTCTCGTC
GAGGCCATCG AGGCGATCGA CCGGACATTC ATGATGGGCG TCCAGTGGCA TCCCGAAAAC
CTCGTGACCG ACGGCCGCAT GCTGAACCTG TTCGATACGC TTGCACGCCA CAGCTTCGAG
GCGCGCAACA GCGGCCGCCT TGAAGCAGCC CAAGGATTGT CGATCGAACT GACCCACAAG
AGCGGAGCCT GGCCCGACAT CACCCTCACC CGAGCCGATT AG
 
Protein sequence
MQTFTPLIGI APKLDDKNSM MHVPVEYVRS IVAAGATPLI LPLTWDMNAY ERLLPSCDGF 
LLCGGLDIEP QRYGRGDTHV NLTAHTPGRD ALECLVVNYA YEFDVPILGI CRGMQMLNVV
RGGTLHLDLS ERASSEEEHI AHDAIEHPFD YVHDVDVVPG TMFAEIVEEE RIPVNSLHHQ
GVNSLGRNMR ASAYATDGLV EAIEAIDRTF MMGVQWHPEN LVTDGRMLNL FDTLARHSFE
ARNSGRLEAA QGLSIELTHK SGAWPDITLT RAD