Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_19180 |
Symbol | |
ID | 8395807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2151275 |
End bp | 2151700 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644986669 |
Product | predicted transcriptional regulator |
Protein accession | YP_003144283 |
Protein GI | 257064611 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.433834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0717748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGTAG GAGAGCGCAT AAGGGCGCTG CGGAGGTCCG CTGGTCTTAC ACAGAAGGAG CTTGCAGCCT CTATCGGGCT TACCGAGTCC GCCGTTCGCA ACTACGAGCT CGGGCTGCGC ACGCCCAGCG ACGATCAGCT CGCCGCCATG GCGGATTCGA TCGGAGTCGC CCCTGAAGCC CTCATGGACA TCCGCGTCGA GAGCGCCAGA CAGGCCCTCG AGGTCCTCTT CAGGATGGAG GATACGCTCG GCTTGGTGCC GCAAAGCGAT GGCGACTCAA TAGGCCTTGG AATCGACCCT GAAGCTGAGC AGGCCCCTAT CATGCACCAG TCCCTCGTGG CCTGGAAGCG CATGCGCGAC GGGCTGGAAG ACGGTACCGT GACCCCTGAT GAGTACGCGG CCTGGAAGGC ATCTTTCACC GCATAG
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Protein sequence | MGVGERIRAL RRSAGLTQKE LAASIGLTES AVRNYELGLR TPSDDQLAAM ADSIGVAPEA LMDIRVESAR QALEVLFRME DTLGLVPQSD GDSIGLGIDP EAEQAPIMHQ SLVAWKRMRD GLEDGTVTPD EYAAWKASFT A
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