Gene Shel_19180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19180 
Symbol 
ID8395807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2151275 
End bp2151700 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content63% 
IMG OID644986669 
Productpredicted transcriptional regulator 
Protein accessionYP_003144283 
Protein GI257064611 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.433834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0717748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTAG GAGAGCGCAT AAGGGCGCTG CGGAGGTCCG CTGGTCTTAC ACAGAAGGAG 
CTTGCAGCCT CTATCGGGCT TACCGAGTCC GCCGTTCGCA ACTACGAGCT CGGGCTGCGC
ACGCCCAGCG ACGATCAGCT CGCCGCCATG GCGGATTCGA TCGGAGTCGC CCCTGAAGCC
CTCATGGACA TCCGCGTCGA GAGCGCCAGA CAGGCCCTCG AGGTCCTCTT CAGGATGGAG
GATACGCTCG GCTTGGTGCC GCAAAGCGAT GGCGACTCAA TAGGCCTTGG AATCGACCCT
GAAGCTGAGC AGGCCCCTAT CATGCACCAG TCCCTCGTGG CCTGGAAGCG CATGCGCGAC
GGGCTGGAAG ACGGTACCGT GACCCCTGAT GAGTACGCGG CCTGGAAGGC ATCTTTCACC
GCATAG
 
Protein sequence
MGVGERIRAL RRSAGLTQKE LAASIGLTES AVRNYELGLR TPSDDQLAAM ADSIGVAPEA 
LMDIRVESAR QALEVLFRME DTLGLVPQSD GDSIGLGIDP EAEQAPIMHQ SLVAWKRMRD
GLEDGTVTPD EYAAWKASFT A