Gene Shel_19070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19070 
Symbol 
ID8395796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2139159 
End bp2140436 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content51% 
IMG OID644986658 
Producthypothetical protein 
Protein accessionYP_003144272 
Protein GI257064600 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0871344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCT ACGAGGCGTA TAAGGATTCT GGAGTTGAGT GGATTGGCGA GATACCCTCT 
ACATGGACTT TAGCCAGGAC GAAAGCAGTG TTCAGCAGTA AGAAACGCGT TGTTGGCGAT
AAGGCTAATG AATATCAGCG CCTTGCACTA ACAATGCATG GCGTATTACT GCGCGATAAA
GATGACAACG AAGGACTTCA GCCGGAGCAA TTTGAGGGTT ACCAAATACT TGAAGCTAAT
GAATTGGTAT TCAAATTAAT AGACTTGGAA AACATTAAAA CAAGCCGTGT TGGCCTTTCG
CCGTATACGG GTATTGTTTC ACCTGCATAT ATAACGCTTA CGCAAACGGA TTCCGACAAT
AGGTACTTCT ATTATTGGTT CTTCGCGCTA TATCAGCAAA ACGTGTTCAA CCAATTAGGT
GGCAATGGTG TCCGGAGTGC GCTCAACAAA GATGATCTTT TGAACCTTCC GATGCTCCTG
CCAAAACAGG ACGAGCAGCG GGCCATCGCC AACTACCTCG ACGCCAGGAC CGCCGAGATC
GACGCGCTCG TTGCGGACTG CGAGCGGGAG GCCGAGCTGC TGCGGGAGTA CCGCAAGGCG
GTCATCTCCG AGGCCGTCAC CAAGGGCCTC GACCCCGACG CGCCCATGAA GGACTCCGGC
GTAGAATGGA TCGGTGAGAT TCCGGAGGGG TGGCTAGTAC GTCCGTCTAA GACGTTGTTT
GCCGAGGCGA AAGAGCTGCG ACACTCCGAT GACGAGCAGT GTGCTGCTAC GCAGAAATAC
GGAATTATCC CTCAGGCTCG GTATATTGCC ATCGAGAATC AACGTATGGT AGTTGCTGAT
AAGAACCTTG ATGCGTGGAA GCACGTTGAG CCAGGGGACT TTGTTATTAG CCTTCGTAGT
TTTCAGGGTG GCTTGGAGCT GAGCGAAATT ACAGGGTGTG TCACTTGGCA CTACATTGTG
CTTAAAGGAA ATGACTTAGT TGAAGCGGGA TATTTCAAGT ATTTGTTTAA GACAACGAAA
TACATAGAGT CGCTTCAAAG GACGTGTACG TATATACGAG ATGGGCAAGA TTTGCGGTAT
TCGAATTTTG TGCAGGTTCC ATTGCCCTTA CCGTCCAGAG AAGAGCAGGT CGCAATTGGT
GTCTACCTCG ACGCCAAAAC CGCCGAAATC GATGCCCTTA TCGAGGCCAA GCAAACCATG
GCCGACAAGC TGCGGGAGTA CCGCAAGTCG CTGATATCCG AGGCGGTCAC GGGTAAGTTC
AAGGTCCCCG GCGTCTAG
 
Protein sequence
MERYEAYKDS GVEWIGEIPS TWTLARTKAV FSSKKRVVGD KANEYQRLAL TMHGVLLRDK 
DDNEGLQPEQ FEGYQILEAN ELVFKLIDLE NIKTSRVGLS PYTGIVSPAY ITLTQTDSDN
RYFYYWFFAL YQQNVFNQLG GNGVRSALNK DDLLNLPMLL PKQDEQRAIA NYLDARTAEI
DALVADCERE AELLREYRKA VISEAVTKGL DPDAPMKDSG VEWIGEIPEG WLVRPSKTLF
AEAKELRHSD DEQCAATQKY GIIPQARYIA IENQRMVVAD KNLDAWKHVE PGDFVISLRS
FQGGLELSEI TGCVTWHYIV LKGNDLVEAG YFKYLFKTTK YIESLQRTCT YIRDGQDLRY
SNFVQVPLPL PSREEQVAIG VYLDAKTAEI DALIEAKQTM ADKLREYRKS LISEAVTGKF
KVPGV