Gene Shel_18880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18880 
Symbol 
ID8395777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2118075 
End bp2118869 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID644986639 
Productphage DNA replication protein (predicted replicative helicase loader) 
Protein accessionYP_003144253 
Protein GI257064581 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.614946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0813321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTGA AAGGAAAGGC CGGCGACGGG CTCGTGACGC CTGAGGAGGC GCGGGCGGCC 
GGCCTCTCCT TCGACGACCC GCCCGAGCCT AAGTGCCGGT TCTGCGGCCG AGGGCTAGAG
CCTCTTGGCG TCGTGCTGCT CGGGCAGGTG CGCTGGGTCT CCCACGAAGC GTGCGGATGC
GAGGGCGAGC TCGCGGAGCA GGCGGAGCGC GAGCGCCGCG AGCGCGAGGA GGCCGAAGCC
GCCATGGCGC GCCGCGTGGC CGAATCGGGC ATCAAGAAGC GCTTCAGGAG CGCTCAGACC
TCCATCCCGG CCGCCGTGTC GTACCTCGGC CGCTTCGGGG ACATACAGGG CCGGGGGCTC
TACTTCCGCG GGGGCGTCGG GGCGGGAAAG ACCACGGCGG CATCCGCCAT CGCACGCGCG
CTCGTCTACA CGGGCTACTC GGTGATCGTC ACGACGACGC TGGAGATGCT CGACTCGATC
CAGGACACGT ACGGGACCGG GTCCAAGAGC GCGGAGGGCG TGGGACGATA CGGGCGATGC
GACCTCCTCG TGCTCGACGA CCTCGGCAAG GAGGGCGCGA ACAGCTGGGC GATGACGACG
CTCTTCCAGG TGGTGAACCG CCGCTACGAG GAGATGCTGC CCACCATCGT CACCTCGCAG
TACGGCATCG AGGAGATCGA GCGCCGCCTC GCCCGCGGCG GCGAGCGCGA GACCGCCGCC
GCAATAGCCT CGCGGCTGCG AGAGACGTGC GAGGTCGTCG ACCTCGGGAA CCGCGACCGC
AGACGCCGAG GATAG
 
Protein sequence
MVLKGKAGDG LVTPEEARAA GLSFDDPPEP KCRFCGRGLE PLGVVLLGQV RWVSHEACGC 
EGELAEQAER ERREREEAEA AMARRVAESG IKKRFRSAQT SIPAAVSYLG RFGDIQGRGL
YFRGGVGAGK TTAASAIARA LVYTGYSVIV TTTLEMLDSI QDTYGTGSKS AEGVGRYGRC
DLLVLDDLGK EGANSWAMTT LFQVVNRRYE EMLPTIVTSQ YGIEEIERRL ARGGERETAA
AIASRLRETC EVVDLGNRDR RRRG